Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H22
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0362 + 22545891-22546541                                         30   1.8  
02_01_0779 - 5812730-5813458                                           29   5.6  
12_02_0904 - 24181766-24181809,24181888-24182066,24182424-241824...    28   9.8  
11_02_0128 - 8620958-8621248,8622986-8623576                           28   9.8  
02_05_0710 - 31115116-31115214,31115747-31115851,31116210-311162...    28   9.8  

>09_06_0362 + 22545891-22546541
          Length = 216

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = -3

Query: 762 ILSXVFTPMANIXPGVGXSWSSRRAGKSXHLLSKYPAAXPHHRRHQAPADPPGQVHL 592
           IL+ +   MA+       S SS  +  S  + +   AA P HRR  AP  PP Q  L
Sbjct: 10  ILTALMADMADSSSSSSSSSSSSSSDDSD-MRASAAAAEPEHRRSPAPPPPPRQQQL 65


>02_01_0779 - 5812730-5813458
          Length = 242

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 600 VHLYPRRAAHRLPRADGVG 544
           +H  PRRAAHRL RA   G
Sbjct: 32  LHSLPRRAAHRLRRASSAG 50


>12_02_0904 -
           24181766-24181809,24181888-24182066,24182424-24182464,
           24182829-24182860,24183816-24184140
          Length = 206

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -3

Query: 654 AAXPHHRRHQ---APADPP-GQVHLYPRRAAHRLPRADGVGLA 538
           A  P  RR     AP+ P  G +HL  R   HR PR  G G A
Sbjct: 22  AILPRTRRRDGDAAPSQPVLGHLHLLKRPPLHRSPRRRGQGAA 64


>11_02_0128 - 8620958-8621248,8622986-8623576
          Length = 293

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 18/58 (31%), Positives = 22/58 (37%)
 Frame = -3

Query: 723 PGVGXSWSSRRAGKSXHLLSKYPAAXPHHRRHQAPADPPGQVHLYPRRAAHRLPRADG 550
           P  G +W    A  +    + YP    H RR  APA P     L P +    L R  G
Sbjct: 104 PKCGTTWLKALAFATA-ARAAYPPRRRHRRRRAAPAAPSQPARLRPVQGGRVLRRGRG 160


>02_05_0710 -
           31115116-31115214,31115747-31115851,31116210-31116260,
           31116393-31116494,31116651-31116883,31117306-31117497,
           31118142-31118322,31118424-31118623,31119105-31119645
          Length = 567

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 636 RRHQAPADPPGQVHLYPRRAAHRLPRADGVG 544
           RRH+APAD  G     P R     P A+G G
Sbjct: 52  RRHEAPADADGSRPPSPPRRGEAKPVANGGG 82


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,958,128
Number of Sequences: 37544
Number of extensions: 363276
Number of successful extensions: 951
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)