Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H22
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69385-1|CAA93424.2|  515|Caenorhabditis elegans Hypothetical pr...    89   4e-18
Z81068-12|CAJ30227.1|  558|Caenorhabditis elegans Hypothetical p...    87   1e-17
Z81068-4|CAE54896.1|  531|Caenorhabditis elegans Hypothetical pr...    87   1e-17
Z81068-3|CAB02983.1|  600|Caenorhabditis elegans Hypothetical pr...    87   1e-17
Z81068-2|CAB02984.1|  562|Caenorhabditis elegans Hypothetical pr...    87   1e-17
Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical pr...    31   0.95 
Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc...    30   2.2  
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF016417-2|AAB65279.2|  533|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z69385-1|CAA93424.2|  515|Caenorhabditis elegans Hypothetical
           protein ZK593.1 protein.
          Length = 515

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 38/85 (44%), Positives = 56/85 (65%)
 Frame = -1

Query: 656 RPRCPIIAVTRHPQTRQGRCTXTRGVLPIVYQEPTASDWLKDVDNRVQSGLRFGRQRGFV 477
           RP  PII V+R  +  + +    RG+ P+ Y +    +W  DV+ RVQ G+  G+ RGF+
Sbjct: 429 RPPVPIITVSRDERISR-QLHLHRGIFPVYYPKGRIDEWDVDVEERVQYGVNLGKTRGFI 487

Query: 476 HPGDNAVVVTGWKQGSGFTNTVRVI 402
           H GD  +V+TGWKQG+GFTNT+R++
Sbjct: 488 HLGDPLIVITGWKQGAGFTNTMRIV 512


>Z81068-12|CAJ30227.1|  558|Caenorhabditis elegans Hypothetical
           protein F25H5.3d protein.
          Length = 558

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 39/88 (44%), Positives = 55/88 (62%)
 Frame = -1

Query: 656 RPRCPIIAVTRHPQTRQGRCTXTRGVLPIVYQEPTASDWLKDVDNRVQSGLRFGRQRGFV 477
           +P  PI+ ++R     + +    RGV P+ Y    A+DW  DVDNR+   +  G+ RGF+
Sbjct: 472 KPAVPILTISRDVAVCR-QLHLYRGVFPVHYPAERAADWPTDVDNRINHAIAIGKDRGFI 530

Query: 476 HPGDNAVVVTGWKQGSGFTNTVRVIQLE 393
           H GD  VVVTGW+QG+G TNT+R+I  E
Sbjct: 531 HKGDFLVVVTGWRQGAGATNTLRIITAE 558


>Z81068-4|CAE54896.1|  531|Caenorhabditis elegans Hypothetical
           protein F25H5.3c protein.
          Length = 531

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 39/88 (44%), Positives = 55/88 (62%)
 Frame = -1

Query: 656 RPRCPIIAVTRHPQTRQGRCTXTRGVLPIVYQEPTASDWLKDVDNRVQSGLRFGRQRGFV 477
           +P  PI+ ++R     + +    RGV P+ Y    A+DW  DVDNR+   +  G+ RGF+
Sbjct: 445 KPAVPILTISRDVAVCR-QLHLYRGVFPVHYPAERAADWPTDVDNRINHAIAIGKDRGFI 503

Query: 476 HPGDNAVVVTGWKQGSGFTNTVRVIQLE 393
           H GD  VVVTGW+QG+G TNT+R+I  E
Sbjct: 504 HKGDFLVVVTGWRQGAGATNTLRIITAE 531


>Z81068-3|CAB02983.1|  600|Caenorhabditis elegans Hypothetical
           protein F25H5.3b protein.
          Length = 600

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 39/88 (44%), Positives = 55/88 (62%)
 Frame = -1

Query: 656 RPRCPIIAVTRHPQTRQGRCTXTRGVLPIVYQEPTASDWLKDVDNRVQSGLRFGRQRGFV 477
           +P  PI+ ++R     + +    RGV P+ Y    A+DW  DVDNR+   +  G+ RGF+
Sbjct: 514 KPAVPILTISRDVAVCR-QLHLYRGVFPVHYPAERAADWPTDVDNRINHAIAIGKDRGFI 572

Query: 476 HPGDNAVVVTGWKQGSGFTNTVRVIQLE 393
           H GD  VVVTGW+QG+G TNT+R+I  E
Sbjct: 573 HKGDFLVVVTGWRQGAGATNTLRIITAE 600


>Z81068-2|CAB02984.1|  562|Caenorhabditis elegans Hypothetical
           protein F25H5.3a protein.
          Length = 562

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 39/88 (44%), Positives = 55/88 (62%)
 Frame = -1

Query: 656 RPRCPIIAVTRHPQTRQGRCTXTRGVLPIVYQEPTASDWLKDVDNRVQSGLRFGRQRGFV 477
           +P  PI+ ++R     + +    RGV P+ Y    A+DW  DVDNR+   +  G+ RGF+
Sbjct: 476 KPAVPILTISRDVAVCR-QLHLYRGVFPVHYPAERAADWPTDVDNRINHAIAIGKDRGFI 534

Query: 476 HPGDNAVVVTGWKQGSGFTNTVRVIQLE 393
           H GD  VVVTGW+QG+G TNT+R+I  E
Sbjct: 535 HKGDFLVVVTGWRQGAGATNTLRIITAE 562


>Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical
           protein C29E6.1a protein.
          Length = 812

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +1

Query: 403 MTRTVLVKPEPCFQPVTTTALSPGCTKPRCRPNRSPLCTRLSTSFSQSDAV 555
           +T T    P+P   P TTT+ +   T P     R P   R ST  S +  V
Sbjct: 417 ITTTTKTSPKPTTSPSTTTSTTTSTTIPPSTTTRKPANPRRSTIMSATSKV 467



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +1

Query: 403 MTRTVLVKPEPCFQPVTTTALSP----GCTKPRCRPNRSPLCTRLSTS 534
           +T T    P+P  +P TTT  SP      TK   +P  SP  T  +T+
Sbjct: 392 LTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTT 439


>Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical
           protein F52F12.6 protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 747 FTPMANIX-PGVGXSWSSRRAGK 682
           FTP  +I  PG G SWS RR GK
Sbjct: 240 FTPNGSIPSPGTGYSWSIRREGK 262


>U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc
           finger proteinC.e-MyT1 protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 747 FTPMANIX-PGVGXSWSSRRAGK 682
           FTP  +I  PG G SWS RR GK
Sbjct: 240 FTPNGSIPSPGTGYSWSIRREGK 262


>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
            R09E10.7 protein.
          Length = 1717

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 696  RRAGKSXHLLSKYPAAXPHHRRHQAPADPPGQVHLYPR 583
            ++  +  H L + P   P  +R Q PA PP   HLYP+
Sbjct: 1388 QQQNQQQHQLQR-PNNAPQPQRLQVPALPPAAYHLYPQ 1424


>AF016417-2|AAB65279.2|  533|Caenorhabditis elegans Hypothetical
           protein F17A9.2 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -3

Query: 690 AGKSXHLLSKYPAAXPHHRRHQAPADPPGQVHLYPRRAAHRLPRADGVGL 541
           +G    L S +PA    H  +Q     PG V L  + AAH  PR    GL
Sbjct: 143 SGTDILLTSVWPADIARHSHNQPSKPQPGSV-LLSKLAAHLKPRYHFAGL 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,360,414
Number of Sequences: 27780
Number of extensions: 318702
Number of successful extensions: 746
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)