Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H22
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   4.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   7.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   7.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   7.5  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    22   7.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   10.0 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   10.0 

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 154 TNYYMYKRNVSRNCILVIGV 95
           TNYY++   +S   +LV+G+
Sbjct: 75  TNYYLFSLAISDLILLVLGL 94


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 154 TNYYMYKRNVSRNCILVIGV 95
           TNYY++   VS    L++G+
Sbjct: 68  TNYYLFNLAVSDLLFLILGL 87


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 595 VHLPWRVCG 621
           + LPWR CG
Sbjct: 132 IDLPWRTCG 140


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 595 VHLPWRVCG 621
           + LPWR CG
Sbjct: 185 IDLPWRTCG 193


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 188 VMRP*IMLNSLRKKIVYDIFFVYGVFI 268
           VMRP +++ S+   ++  I  +YG+ +
Sbjct: 45  VMRPELIMKSIIPVVMAGIIAIYGLVV 71


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 170 DIHYDIVMRP*IMLNSLRKKIVYDIFFVYGV 262
           D  YD + RP   +NS+    VY   ++Y +
Sbjct: 20  DCRYDKMTRPPGEINSINPINVYTKAYIYTI 50


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 554 TASDWLKDVDNRVQSGLRFGRQRG 483
           + ++W+    +  +   RFGRQRG
Sbjct: 344 SVTNWVSGNHDNHRVASRFGRQRG 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,262
Number of Sequences: 438
Number of extensions: 3591
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)