Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_H21
(780 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 2.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 2.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 2.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 2.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.2
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 3.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.6
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 642 PNLTVLHIYRXNYTLSFPSNFSL 710
PN +VL+ R + TLS P N L
Sbjct: 144 PNGSVLYSIRISLTLSCPMNLKL 166
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 642 PNLTVLHIYRXNYTLSFPSNFSL 710
PN +VL+ R + TLS P N L
Sbjct: 144 PNGSVLYSIRISLTLSCPMNLKL 166
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 576 RTQVKRPRRGPDLRSLTRHTDDPNLTVLHIYRXNYTLSFP 695
R + K P+ L + T H ++ N L Y NY P
Sbjct: 73 RERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIP 112
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 576 RTQVKRPRRGPDLRSLTRHTDDPNLTVLHIYRXNYTLSFP 695
R + K P+ L + T H ++ N L Y NY P
Sbjct: 73 RERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIP 112
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 576 RTQVKRPRRGPDLRSLTRHTDDPNLTVLHIYRXNYTLSFP 695
R + K P+ L + T H ++ N L Y NY P
Sbjct: 73 RERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIP 112
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 576 RTQVKRPRRGPDLRSLTRHTDDPNLTVLHIYRXNYTLSFP 695
R + K P+ L + T H ++ N L Y NY P
Sbjct: 73 RERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIP 112
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 576 RTQVKRPRRGPDLRSLTRHTDDPNLTVLHIYRXNYTLSFP 695
R + K P+ L + T H ++ N L Y NY P
Sbjct: 306 RERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIP 345
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 471 PPAPSGPDSSK 439
PP+ SGPDS+K
Sbjct: 347 PPSSSGPDSAK 357
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 134 IVSSIAFDNKDISDNYLSKLSSNKLAV 214
+VS FD K +SD + KLS + +V
Sbjct: 209 VVSDPIFDKKAMSDLVICKLSHSNASV 235
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 134 IVSSIAFDNKDISDNYLSKLSSNKLAV 214
+VS FD K +SD + KLS + +V
Sbjct: 209 VVSDPIFDKKAMSDLVICKLSHSNASV 235
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 5.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 606 PDLRSLTRHTDDPNLTVLHIYRXNYTLSFPSNFSLA 713
P + L + P LTV H YR T+ P N +A
Sbjct: 1280 PQQQQLPPSSPQPRLTVNHAYRDAVTV--PGNNLIA 1313
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,052
Number of Sequences: 438
Number of extensions: 4246
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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