Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_H20
(773 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 95 2e-19
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 95 2e-19
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 95 2e-19
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 94 6e-19
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 92 2e-18
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 259 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 318
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 319 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 348
Score = 52.0 bits (119), Expect = 2e-06
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRR-IQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 251
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 252 TESAFRKLDEL 262
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 237 LKLAPGGHVGRFCIWTESAFRKLDEL 262
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 252
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 253 TESAFRKLDEL 263
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDEL 263
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 93.9 bits (223), Expect = 6e-19
Identities = 43/90 (47%), Positives = 59/90 (65%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 260 LDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 319
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + LR A+ +L
Sbjct: 320 KNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 55.6 bits (128), Expect = 2e-07
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLNXPEAGSG 617
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN + G
Sbjct: 193 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPG 243
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IW +SAF +LD L
Sbjct: 238 LKLAPGGHVGRFCIWIESAFRKLDEL 263
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/90 (47%), Positives = 58/90 (64%)
Frame = -1
Query: 566 LTPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL 387
L L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL
Sbjct: 274 LDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPL 333
Query: 386 TNNKAMLKLNPYAAVXEEESYLRAAQKEEL 297
N + MLKLNPYA + L A+ +L
Sbjct: 334 KNLRIMLKLNPYAKTMRRNTILCQARNHKL 363
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = -2
Query: 769 KGKMXNRXXIQRKXPLXXFXXDQGXTRAFRNIPRVELLNVNKLN----XPEAGSGR-SSW 605
KGKM NR IQR+ P + D G +AFRNIP + LLNV+KLN P GR W
Sbjct: 207 KGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIW 266
Query: 604 T---FRHLDSV 581
T FR LD +
Sbjct: 267 TESAFRKLDEL 277
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 633 LKLAPGGHLGRFVIWTQSAFGRLDPL 556
LKLAPGGH+GRF IWT+SAF +LD L
Sbjct: 252 LKLAPGGHVGRFCIWTESAFRKLDEL 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,397,813
Number of Sequences: 237096
Number of extensions: 1704091
Number of successful extensions: 3756
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3756
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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