Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H20
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.26 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   7.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 509 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 417
           LP P   N  L  L+ S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 408  YTQIEPAH*QQGDAETQS 355
            YT  +PA+ QQG A+ Q+
Sbjct: 997  YTPPQPANAQQGQAQAQA 1014


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 640 NXPEAGSGRSSWTFRHLDSVRI 575
           N P  G   S + FRH+  + I
Sbjct: 362 NQPSEGEDISDYKFRHITEITI 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,234
Number of Sequences: 438
Number of extensions: 2762
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)