Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H14
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   1.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   7.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.3  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   9.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.6  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +2

Query: 134 VAAVGLASTVAGCLLTGGRVGAWD--VFPLPL 223
           V  VG +S +A  ++ G R+G +D  + PLPL
Sbjct: 187 VHLVGGSSALACAIMLGPRLGRYDNGIDPLPL 218


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = -2

Query: 492 HASSNCHRAVRCVRC---AGEHIVADCPRPREGPFTCANCGRGHAAVDKRCVVYRR 334
           H     H+   C +    +G+ ++       E P+ C  CG+G     K+  V+ R
Sbjct: 170 HTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTC-SKQLKVHTR 224


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 291 PATRAVQAPTPAPRIAPLPS 232
           P      +P+P PRIA  PS
Sbjct: 503 PVVETNSSPSPNPRIASAPS 522


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 291 PATRAVQAPTPAPRIAP 241
           P  R +  PTP PR  P
Sbjct: 146 PRFRCIGPPTPFPRFIP 162


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 219  GKGKTSQAPTLPPVNRQPATV 157
            G+G++S+     P NR PA +
Sbjct: 1296 GEGQSSKVAAQVPTNRVPARI 1316


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 219  GKGKTSQAPTLPPVNRQPATV 157
            G+G++S+     P NR PA +
Sbjct: 1292 GEGQSSKVAAQVPTNRVPARI 1312


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 408 EGPFTCANCGRGHA 367
           E PF+C +C R  A
Sbjct: 68  EKPFSCQHCNRAFA 81


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 366  AVDKRCVVYRRRARMMGVTIPPPVPP 289
            +V +R V   R   + G   PPP PP
Sbjct: 1839 SVGRRSVGSARNIPVSGSPEPPPPPP 1864


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,965
Number of Sequences: 438
Number of extensions: 5808
Number of successful extensions: 47
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)