Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_H11
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa su... 77 1e-13
BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein. 77 1e-13
BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix... 77 1e-13
BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix... 77 1e-13
AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associa... 77 1e-13
AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associa... 77 1e-13
AC021097-1|AAS00380.1| 170|Homo sapiens unknown protein. 77 1e-13
U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa su... 76 2e-13
U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa su... 76 2e-13
BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix... 76 2e-13
AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related, matrix... 76 2e-13
BC018953-1|AAH18953.2| 78|Homo sapiens SMARCD2 protein protein. 44 7e-04
AK131301-1|BAD18469.1| 544|Homo sapiens protein ( Homo sapiens ... 30 8.8
AB033066-1|BAA86554.1| 733|Homo sapiens KIAA1240 protein protein. 30 8.8
>U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 475
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLD 333
PDPIVIN VI+V+P +D K+TA YD DVEV D LKAQM NFL ST NQQEI LD
Sbjct: 328 PDPIVINHVISVDP-NDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLD 381
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLK 202
ET+++INQL T R+F L FS DPQ FIQ+WL SQ RDLK
Sbjct: 386 ETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK 424
>BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein.
Length = 531
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLD 333
PDPIVIN VI+V+P +D K+TA YD DVEV D LKAQM NFL ST NQQEI LD
Sbjct: 384 PDPIVINHVISVDP-NDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLD 437
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLK 202
ET+++INQL T R+F L FS DPQ FIQ+WL SQ RDLK
Sbjct: 442 ETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK 480
>BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
PDPIVIN VI+V+P D K+TA YD DVEV + LK QM +FLLSTANQQEI LDS+
Sbjct: 323 PDPIVINHVISVDPS-DQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSK 378
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET+++INQL R+F L FS+DP+ ++Q L SQSRDLK M+
Sbjct: 381 ETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMT 422
>BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
PDPIVIN VI+V+P D K+TA YD DVEV + LK QM +FLLSTANQQEI LDS+
Sbjct: 323 PDPIVINHVISVDPS-DQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSK 378
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET+++INQL R+F L FS+DP+ ++Q L SQSRDLK M+
Sbjct: 381 ETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMT 422
>AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 1 protein.
Length = 470
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
PDPIVIN VI+V+P D K+TA YD DVEV + LK QM +FLLSTANQQEI LDS+
Sbjct: 323 PDPIVINHVISVDPS-DQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSK 378
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET+++INQL R+F L FS+DP+ ++Q L SQSRDLK M+
Sbjct: 381 ETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMT 422
>AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 2 protein.
Length = 483
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
PDPIVIN VI+V+P D K+TA YD DVEV + LK QM +FLLSTANQQEI LDS+
Sbjct: 336 PDPIVINHVISVDPS-DQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSK 391
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET+++INQL R+F L FS+DP+ ++Q L SQSRDLK M+
Sbjct: 394 ETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMT 435
>AC021097-1|AAS00380.1| 170|Homo sapiens unknown protein.
Length = 170
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
PDPIVIN VI+V+P D K+TA YD DVEV + LK QM +FLLSTANQQEI LDS+
Sbjct: 23 PDPIVINHVISVDPS-DQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSK 78
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET+++INQL R+F L FS+DP+ ++Q L SQSRDLK M+
Sbjct: 81 ETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMT 122
>U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 469
Score = 75.8 bits (178), Expect = 2e-13
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
PDPIVIN VI+V+P D K+TA YD DVEV + LK QM +FLLSTANQQEI LDS+
Sbjct: 322 PDPIVINHVISVDPS-DQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISPLDSK 377
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET+++INQL R+F L FS+DP+ ++Q L SQSRDLK M+
Sbjct: 380 ETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMT 421
>U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 435
Score = 75.8 bits (178), Expect = 2e-13
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
P+PI+IN VI+V+P +D K+TA YD DVEV DTLK QM++FLLSTA+QQEI LD++
Sbjct: 329 PEPIIINHVISVDP-NDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNK 384
>BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 476
Score = 75.8 bits (178), Expect = 2e-13
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
P+PI+IN VI+V+P +D K+TA YD DVEV DTLK QM++FLLSTA+QQEI LD++
Sbjct: 329 PEPIIINHVISVDP-NDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNK 384
Score = 62.1 bits (144), Expect = 2e-09
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET++TINQL T REF L F++DPQ FI WL SQ RDLK+M+
Sbjct: 387 ETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMT 428
>AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related,
matrix-associated, actin-dependent regulator of
chromatin D1 protein.
Length = 453
Score = 75.8 bits (178), Expect = 2e-13
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = -1
Query: 497 PDPIVINXVIAVEPPHDAKQTA*YDXDVEVXDTLKAQMHNFLLSTANQQEIQGLDSQ 327
P+PI+IN VI+V+P +D K+TA YD DVEV DTLK QM++FLLSTA+QQEI LD++
Sbjct: 306 PEPIIINHVISVDP-NDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNK 361
Score = 62.1 bits (144), Expect = 2e-09
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -3
Query: 318 ETVDTINQLXTNREFFLXFSKDPQQFIQKWLVSQSRDLKSMS 193
ET++TINQL T REF L F++DPQ FI WL SQ RDLK+M+
Sbjct: 364 ETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMT 405
>BC018953-1|AAH18953.2| 78|Homo sapiens SMARCD2 protein protein.
Length = 78
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 282 REFFLXFSKDPQQFIQKWLVSQSRDLK 202
R+F L FS DPQ FIQ+WL SQ RDLK
Sbjct: 1 RDFMLSFSTDPQDFIQEWLRSQRRDLK 27
>AK131301-1|BAD18469.1| 544|Homo sapiens protein ( Homo sapiens
cDNA FLJ16266 fis, clone IMR322013731, weakly similar
to TAT-BINDING HOMOLOG 7. ).
Length = 544
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -2
Query: 370 SAPPTSRRSKASTHK--IHRDCG-HHQPVVXKPRVLLEXQQGS 251
S P + S A+ HK +H +HQP +PR+LL ++GS
Sbjct: 203 SGSPKKQSSSAAIHKPYLHFTMSPYHQPTSYRPRLLLSGERGS 245
>AB033066-1|BAA86554.1| 733|Homo sapiens KIAA1240 protein protein.
Length = 733
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -2
Query: 370 SAPPTSRRSKASTHK--IHRDCG-HHQPVVXKPRVLLEXQQGS 251
S P + S A+ HK +H +HQP +PR+LL ++GS
Sbjct: 15 SGSPKKQSSSAAIHKPYLHFTMSPYHQPTSYRPRLLLSGERGS 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,262,266
Number of Sequences: 237096
Number of extensions: 1187736
Number of successful extensions: 2394
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2383
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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