Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H08
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0139 + 1105857-1107008,1107124-1107328,1107583-1107768,110...    30   2.0  
05_05_0038 - 21769936-21770199,21770785-21771198,21771274-217714...    30   2.0  
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270...    29   4.6  
11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767...    28   8.1  

>08_01_0139 +
           1105857-1107008,1107124-1107328,1107583-1107768,
           1107924-1108133,1108552-1109186
          Length = 795

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 10  FFFHIPSGYGMNSPPRCFPNAMTCPSS--NEACG 105
           + FH P G G  S  R F  ++ C SS  N+ CG
Sbjct: 186 YLFHGPHGIGKTSAARIFAASLNCHSSGGNQPCG 219


>05_05_0038 -
           21769936-21770199,21770785-21771198,21771274-21771434,
           21771544-21771607,21771682-21771864,21772355-21772520,
           21773397-21773528,21775085-21775599
          Length = 632

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -1

Query: 480 KASKYIRESVKVTPVINKLKSGRLAWYGHVMRGEKMYGNGSAS*RGKRSI 331
           KA K+  E V++T + N   + RLA  G V      YG G+   +GKR +
Sbjct: 244 KAGKH-PEKVELTCLANARSTSRLAPAGTVRAAVAAYGRGAGKGKGKRRV 292


>06_03_1067 -
           27326167-27326295,27326572-27326656,27326993-27327033,
           27327274-27327333,27327843-27327962,27328842-27329114,
           27329186-27329257,27329798-27329860,27329957-27330139,
           27330544-27330660,27330734-27332683,27332770-27332907,
           27333003-27333284,27334650-27335522
          Length = 1461

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 307 TNSIHVYFDRPLPPLACTTISIHLLSTHHMSIPC*PSAL 423
           T++ H+  + P  P+  T +S HL S  H S  C P A+
Sbjct: 474 TDAPHIATEAPNKPVEATHVSPHLPSYVHQSKSCIPKAV 512


>11_02_0042 -
           7672565-7672729,7672902-7672977,7673409-7674132,
           7674684-7674708,7675041-7675486,7676643-7676862,
           7677609-7678459,7678697-7679555
          Length = 1121

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 10  FFFHIPSGYGMNSPPRCFPNAMTCPS--SNEACG 105
           + FH P G G  S  R F  A++C +   N+ CG
Sbjct: 372 YLFHGPRGTGKTSAARIFSAALSCVAIGENKPCG 405


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,883,138
Number of Sequences: 37544
Number of extensions: 379820
Number of successful extensions: 1015
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)