Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H07
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0064 - 553733-553821,554186-554277,554332-554360,554554-55...    30   2.5  
11_01_0062 - 476027-476044,476791-477195,477287-477574,477653-47...    30   2.5  

>12_01_0064 -
           553733-553821,554186-554277,554332-554360,554554-554958,
           555046-555333,555412-555499,556428-556626,556738-556876,
           556991-557041
          Length = 459

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +3

Query: 462 QQFAR-DPCP*MKRIISFMCTLSISLSLVTGCTNVRHKLSSAYVTNNP*NMPSFLXLSS 635
           ++F R +P P    I+SF    SI+ S++T  ++V H    A    NP  +P  + LS+
Sbjct: 270 KEFLRQNPLPPEVPIVSFHTEASITPSVLTALSHVAHLELPAAADGNPTRIPVVMPLSA 328


>11_01_0062 -
           476027-476044,476791-477195,477287-477574,477653-477830,
           478005-478133,478531-478729,478832-478970,479130-479195,
           480459-480580,480672-480742,480819-480903,481335-481453,
           481577-481687,481945-482117,482375-482446,482768-482862,
           483361-483450,483550-483646
          Length = 818

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +3

Query: 462 QQFAR-DPCP*MKRIISFMCTLSISLSLVTGCTNVRHKLSSAYVTNNP*NMPSFLXLSS 635
           ++F R +P P    I+SF    SI+ S++T  ++V H    A    NP  +P  + LS+
Sbjct: 693 KEFLRQNPLPPEVPIVSFHTEASITPSVLTALSHVAHLELPAAADGNPTRIPVVMPLSA 751


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,798,353
Number of Sequences: 37544
Number of extensions: 215309
Number of successful extensions: 270
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)