Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_H01
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006610-1|AAK85447.4|  360|Caenorhabditis elegans Hypothetical ...    85   7e-17
AL132952-10|CAB63384.1|  591|Caenorhabditis elegans Hypothetical...    47   2e-05
AF125445-1|AAD12803.2|  550|Caenorhabditis elegans Hypothetical ...    47   2e-05
U23524-1|AAC46822.1|  268|Caenorhabditis elegans Hypothetical pr...    42   5e-04
U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical pr...    34   0.13 

>AC006610-1|AAK85447.4|  360|Caenorhabditis elegans Hypothetical
           protein C30F12.1 protein.
          Length = 360

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 40/79 (50%), Positives = 54/79 (68%)
 Frame = -1

Query: 595 TDPKXXXALEKVGNVVYTPSREVDGKFITPYDDRYIIQCAAEFDGVIVSGDNYRDLIDEN 416
           TD      +E+  +++YTPSR V+G+ +  +DDRYI++ A   D VIVS D YRDL  EN
Sbjct: 284 TDQHILQEIER--HIIYTPSRNVNGRRVVCHDDRYILRTAELKDAVIVSNDEYRDLTREN 341

Query: 415 PTWRYIIKNRLLPFTWVED 359
           P WR I++ RLL FT+VED
Sbjct: 342 PAWRKIVEERLLMFTFVED 360


>AL132952-10|CAB63384.1|  591|Caenorhabditis elegans Hypothetical
           protein Y51H4A.13 protein.
          Length = 591

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -1

Query: 499 DRYIIQCAAEFDGVIVSGDNYRDLIDENPTWRYIIKNRLLPFTWVEDMIMFPKD-PLGRN 323
           +R ++  A E  G +V+    + + D       +++ RLL  T+  D IMFP D PLGRN
Sbjct: 124 NRIMVNRAYETGGCLVARSQMQGITDNKSHLIDVVEQRLLMPTFNGDDIMFPIDGPLGRN 183

Query: 322 GPTLDQFLRHD 290
           GP+L+Q L+ D
Sbjct: 184 GPSLEQTLQCD 194


>AF125445-1|AAD12803.2|  550|Caenorhabditis elegans Hypothetical
           protein Y24D9B.1 protein.
          Length = 550

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -1

Query: 499 DRYIIQCAAEFDGVIVSGDNYRDLIDENPTWRYIIKNRLLPFTWVEDMIMFPKD-PLGRN 323
           +R ++  A E  G +V+    + + D       +++ RLL  T+  D IMFP D PLGRN
Sbjct: 124 NRIMVNRAYETGGCLVARSQMQGITDNKSHLIDVVEQRLLMPTFNGDDIMFPIDGPLGRN 183

Query: 322 GPTLDQFLRHD 290
           GP+L+Q L+ D
Sbjct: 184 GPSLEQTLQCD 194


>U23524-1|AAC46822.1|  268|Caenorhabditis elegans Hypothetical
           protein C29F5.3 protein.
          Length = 268

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
 Frame = -1

Query: 505 YDDRYIIQCAAEFDGVIVSGDNYRDLIDE--NPTWRYIIKNRLLPFTW---VEDMIMFPK 341
           YDD Y++  AA   G IVSGD ++D++++     + ++I+NR +   +     D + +  
Sbjct: 17  YDDLYVVSYAARHGGTIVSGDKFKDILNQPCYSDFHHVIRNRTVDVKFRPLTLDFVEYQS 76

Query: 340 DPLGRNGPTL 311
           D   R+ P L
Sbjct: 77  DRFYRHAPEL 86


>U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical
           protein ZC477.5 protein.
          Length = 339

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -1

Query: 502 DDRYIIQCAAEFDGVIVSGDNYRDLIDENPTWRYIIKNRLLPFTW 368
           DD   +Q A++ +GV+++ D YRD   ++  +  I++   L   W
Sbjct: 157 DDSVALQFASQINGVVITTDQYRDHASDSLRFNTIVRENRLGIKW 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,035,895
Number of Sequences: 27780
Number of extensions: 334636
Number of successful extensions: 685
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)