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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_G24
         (784 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe...    31   0.14 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    31   0.19 
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    31   0.25 
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    30   0.33 
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb...    30   0.43 
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi...    30   0.43 
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe...    30   0.43 
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    28   1.3  
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s...    28   1.7  
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy...    28   1.7  
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c...    27   3.0  
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch...    26   5.3  
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub...    26   7.0  
SPAC23G3.07c |snf30||SWI/SNF complex subunit Snf30|Schizosacchar...    26   7.0  
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    26   7.0  
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb...    25   9.3  

>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 349

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSS 609
           S  SL+S + S++    P T SS+  S+ S + + S SSS  SK    +SS
Sbjct: 124 SSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSS 174



 Score = 25.8 bits (54), Expect = 7.0
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 481 SNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLRSS 651
           S+S++        SS   S+ S T + + SSS  S    ++SS +  SS+  + RSS
Sbjct: 117 SSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSS 173



 Score = 25.4 bits (53), Expect = 9.3
 Identities = 22/67 (32%), Positives = 33/67 (49%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAV 636
           S  S  S S+S+       ++SSA    PS T + S SSS  S     +SS +  SS+  
Sbjct: 116 SSSSSSSSSSSSLVSSTTSSSSSAT---PSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRS 172

Query: 637 TLRSSLH 657
           + R++ H
Sbjct: 173 SSRTTSH 179


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 31.1 bits (67), Expect = 0.19
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +1

Query: 484 NSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIA-GVSSTAVTLRSS 651
           NST P     T+     ++  LT T   S++F S   ++TSS +   SST+    SS
Sbjct: 620 NSTTPITGTSTSKVTSSTSIPLTSTNRTSTTFTSSTSISTSSSSTATSSTSFASESS 676


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 30.7 bits (66), Expect = 0.25
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +1

Query: 454 PSVRSLLSMSNSTAPYLCPETASSAKKSNP-SLTKTRSLSSSFKSKCCVATSSIAGVSST 630
           PS  SL   S+ST+      T SSA  S+P S++ + S SS+  S    +TSS+  +SS+
Sbjct: 587 PSSTSLSISSSSTS-----STFSSASTSSPSSISSSISSSSTILSSPTPSTSSLM-ISSS 640

Query: 631 AVTLRSSLHLLRNIQRLP 684
           ++   SS  L  +I  +P
Sbjct: 641 SIISGSSSILSSSISTIP 658



 Score = 26.2 bits (55), Expect = 5.3
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLT----KTRSLSSSFKSKCCVATSSIAGVS 624
           ++ S +S S+  + +    +  S+  S+PS T     + S SS+F S    + SSI+   
Sbjct: 559 TISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSI 618

Query: 625 STAVTLRSS 651
           S++ T+ SS
Sbjct: 619 SSSSTILSS 627


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 30.3 bits (65), Expect = 0.33
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +1

Query: 436 LGGDERPSVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCC----VAT 603
           L      S  S+ S S+ST     P + SS+  S+ S+  + S  SS  S       ++T
Sbjct: 178 LSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLST 237

Query: 604 SSIAGVSSTAVTLRSSL 654
           SSI   SS++ +  SSL
Sbjct: 238 SSIPSTSSSSSSTSSSL 254



 Score = 28.3 bits (60), Expect = 1.3
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAV 636
           S  S +S S+S+       + +S+ KS+ S + T S SSS  S    ++SS +   +++ 
Sbjct: 338 SSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSS 397

Query: 637 TLRSSL 654
           +  SSL
Sbjct: 398 SHSSSL 403



 Score = 27.5 bits (58), Expect = 2.3
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSS-IAGVSSTA 633
           S  S  S S+S++  +   ++SS+  S+P+ T +   SSS  S    +TSS I+  SS++
Sbjct: 258 SSSSTASSSSSSSSII---SSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314

Query: 634 VTLRSSL 654
            +  S+L
Sbjct: 315 SSFSSTL 321



 Score = 26.6 bits (56), Expect = 4.0
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 475 SMSNSTAPYLCPET--ASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTA 633
           S S+S++P     T  +SS+  S+P+ T +   SSS  S    +T S + +SS++
Sbjct: 276 SSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSS 330



 Score = 26.6 bits (56), Expect = 4.0
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = +1

Query: 457 SVRSLL--SMSNSTAPYLCPETASSAKKSNPSLTKTRSLS--SSFKSKCCVATSSIAGVS 624
           S  S +  S S+S++P     T SS+  S+ S + T S S  SS  S     TSS + +S
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344

Query: 625 STAVTLRSS 651
           S++ +  SS
Sbjct: 345 SSSSSPSSS 353



 Score = 26.2 bits (55), Expect = 5.3
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPE----TASSAKKSNPSLTKTRSLSS---SFKSKCCVATSSIA 615
           S+ S  S S+ST+  L       TASS+  S+  ++ + S SS   S  S    ++SS +
Sbjct: 239 SIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSS 298

Query: 616 GVSSTAVTLRSS 651
             +ST+ T+ SS
Sbjct: 299 SPTSTSSTISSS 310



 Score = 25.4 bits (53), Expect = 9.3
 Identities = 16/65 (24%), Positives = 34/65 (52%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAV 636
           S  S  + +++++ YL   +  S+  S  S + +   SSS  +    +TSS +  +S+++
Sbjct: 195 STFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSL 254

Query: 637 TLRSS 651
           +  SS
Sbjct: 255 SSSSS 259


>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1334

 Score = 29.9 bits (64), Expect = 0.43
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 481 SNSTAPYLCPETASSAKKS-NPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLRSSLH 657
           +NS +P L   T+S    + NP   + +S SS+      V  + ++ VSS   ++ ++LH
Sbjct: 143 NNSNSPSLTWHTSSGDDSNQNPFFVRRQSQSSTSPVSDSVDENLLSAVSSVTESVETNLH 202

Query: 658 LLRN 669
           L +N
Sbjct: 203 LDQN 206


>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 374

 Score = 29.9 bits (64), Expect = 0.43
 Identities = 18/62 (29%), Positives = 35/62 (56%)
 Frame = +1

Query: 466 SLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLR 645
           S +S + S++    P ++S+   ++PS + + S SSS  S    ++SS +  SS++ +  
Sbjct: 130 SSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 189

Query: 646 SS 651
           SS
Sbjct: 190 SS 191



 Score = 29.5 bits (63), Expect = 0.57
 Identities = 18/59 (30%), Positives = 33/59 (55%)
 Frame = +1

Query: 475 SMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLRSS 651
           S + +T+P     ++SS+  S+ S + + S SSS  S    ++SS +  SS++ +  SS
Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 206



 Score = 29.5 bits (63), Expect = 0.57
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAV 636
           S  S  S S+S++      ++SS+  S+ S + + S SSS  S    ++SS+   SST+ 
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSS 216

Query: 637 TLRSS 651
           +  SS
Sbjct: 217 SHSSS 221



 Score = 27.1 bits (57), Expect = 3.0
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAV 636
           S  S  S S+S++      ++SS+  S+ S + + S SSS  S     TSS +   S++ 
Sbjct: 163 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSS 222

Query: 637 TLRSS 651
           +  SS
Sbjct: 223 SSSSS 227



 Score = 25.4 bits (53), Expect = 9.3
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAV 636
           S  S  S S+S++      ++SS+  S+ S + + S SSS       +TSS    SS++ 
Sbjct: 166 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSS 225

Query: 637 TLRSS 651
           +  SS
Sbjct: 226 SSSSS 230


>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 317

 Score = 29.9 bits (64), Expect = 0.43
 Identities = 18/48 (37%), Positives = 31/48 (64%)
 Frame = +1

Query: 508 PETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLRSS 651
           P ++SS+  S+PS + ++S SSS KS    ++SS +  SS++ +  SS
Sbjct: 154 PSSSSSSSSSSPSSSSSKS-SSSSKSSSSSSSSSKSSSSSSSSSKSSS 200


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 466 SLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLR 645
           S L+ S+S A      T S++  S+ SLT + + SSS  S     +SS+A  S T+ +L 
Sbjct: 83  SSLTSSSSLASSSTNSTTSASPTSS-SLTSSSATSSSLASS-STTSSSLASSSITSSSLA 140

Query: 646 SS 651
           SS
Sbjct: 141 SS 142



 Score = 25.8 bits (54), Expect = 7.0
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = +1

Query: 481 SNSTAPYLCPETASSAKKSNPSLTKTR----SLSSSFKSKCCVATSSIAGVSSTAVTLRS 648
           ++ T+  L   +A+S+  ++ S T +     S++SS  +   + +SS+A  S+T+ +L S
Sbjct: 102 ASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLAS 161

Query: 649 S 651
           S
Sbjct: 162 S 162



 Score = 25.4 bits (53), Expect = 9.3
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 520 SSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLRS 648
           +++  S+ SLT + + SSS  S   +A+SS    +S + T  S
Sbjct: 66  NTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSS 108



 Score = 25.4 bits (53), Expect = 9.3
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAV 636
           S  +  S  +STA      ++S A  S  S T   + SSS  S    +T   +  S+TA 
Sbjct: 205 SATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAA 264

Query: 637 TLRSS 651
           T  S+
Sbjct: 265 TSASA 269



 Score = 25.4 bits (53), Expect = 9.3
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = +1

Query: 466 SLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLR 645
           S LS + ++        ASS+  S  S T T S  SS  S     TSS +  ++T+ +  
Sbjct: 211 SSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASAT 270

Query: 646 SS 651
           SS
Sbjct: 271 SS 272


>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
           subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 657

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 452 LSSPPKQFLEDKVLEEVHSILDDDGHFILNLVCRDVELQASMLL 321
           L SPP  F       +V+S++DDDGH  L+  C    ++   LL
Sbjct: 231 LYSPPPDF-------QVNSVIDDDGHTSLHWACSMGHIEMIKLL 267


>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 385

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 457 SVRSLLSMSNSTAPYLCP-ETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTA 633
           S+ S  S S+  +    P  T SS+    PS ++T S SSS      V++S  + VSST 
Sbjct: 79  SISSSSSTSSEYSSSSIPITTVSSSDSFIPSSSQTISASSSTTDNVIVSSSISSTVSSTP 138

Query: 634 VT 639
           V+
Sbjct: 139 VS 140


>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 625

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = +1

Query: 475 SMSNSTAPYLCPETASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLRSSL 654
           SMS S +        SS+K S+ S   +RS SSS  S    +TSS +G S T  +   S+
Sbjct: 514 SMSASLSSVHTSSATSSSKSSSSS--SSRSGSSSSSSSRSGSTSS-SGSSHTITSTSQSV 570

Query: 655 H 657
           H
Sbjct: 571 H 571


>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1822

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 473 SKDRTLGLSSPPKQFLEDKVLEEVHSILDD--DGHFILNLV 357
           SKD+T     PPK  L+  V     SI D+  DG+  LN+V
Sbjct: 219 SKDKTPASFGPPKSLLQCMVDMVCDSINDEVVDGNLQLNVV 259


>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
           Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1129

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +3

Query: 582 VEVLCGDLKHRGGQLHGGHVEVL 650
           V VL G L H GG LHGGH   L
Sbjct: 464 VYVLHGVLVH-GGDLHGGHYYAL 485


>SPAC23G3.07c |snf30||SWI/SNF complex subunit
           Snf30|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 274

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 454 PSVRSLLSMSNSTAPYLCPETASSAKKSNPSLTKTRSLSS 573
           PS     S +N T  +    T    +K+NPSLT++ S+SS
Sbjct: 128 PSNGDSSSYANGTDLHGNTGTMQQEEKANPSLTRSDSVSS 167


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +1

Query: 517 ASSAKKSNPSLTKTRSLSSSFKSKCCV 597
           ++S + SN ++T+ +++ SSF S+C V
Sbjct: 75  STSEQPSNSNVTEEKNMGSSFHSECKV 101


>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 262

 Score = 25.4 bits (53), Expect = 9.3
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +1

Query: 514 TASSAKKSNPSLTKTRSLSSSFKSKCCVATSSIAGVSSTAVTLRSS 651
           ++S+A  S+ S T + S SSS        TSSI+  +S++V+  S+
Sbjct: 143 SSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSA 188


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,796,636
Number of Sequences: 5004
Number of extensions: 51954
Number of successful extensions: 219
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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