Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_G20
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772...    32   0.59 
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773...    31   1.4  
06_03_0632 - 22949942-22951351                                         30   2.4  
03_04_0007 + 16265360-16266982                                         29   4.2  
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817           29   5.5  
09_06_0081 + 20745627-20748144,20748211-20748308                       28   9.7  
05_01_0135 + 908803-909059,913133-913187,913499-914047,914140-91...    28   9.7  

>02_05_0136 +
           26174965-26175849,26176965-26177030,26177124-26177258,
           26177369-26177434,26177516-26177701,26177777-26177863,
           26177985-26178098,26178174-26178298,26178375-26178483,
           26179298-26179423,26179511-26179831,26180146-26180269,
           26180405-26180529
          Length = 822

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 25/78 (32%), Positives = 33/78 (42%)
 Frame = +2

Query: 377 ANGPEAGPRRGSRHAPRAGGLRTAASSPRFEGC*TSLRRSAVTVPLPPHVSSARTGRRQW 556
           A+GP       S    R G    AA+    +G  TS   +A T P PP   S++ G  +W
Sbjct: 82  ASGPGEASSSSSGDGDRDGA--AAAAEAGGDGASTSTTSAAATPPQPP---SSKRGENKW 136

Query: 557 PRPLLAAPPVDRPR*WSP 610
            R L+    V R   W P
Sbjct: 137 RRKLIKGGGVGRWL-WEP 153


>08_02_1237 +
           25475219-25475916,25476127-25476320,25476407-25477302,
           25477416-25477490,25477582-25477689,25477780-25477897,
           25478007-25478142,25478228-25478372,25478460-25479080,
           25479166-25479597
          Length = 1140

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 509 PLPPHVSSARTGRRQWPRPLLAAPPVDRPR*WSPAL 616
           PLPPH ++A+     WP   +AA        W+P +
Sbjct: 20  PLPPHATAAKKRGNPWPAAAVAAAEAKGGGNWNPRM 55


>06_03_0632 - 22949942-22951351
          Length = 469

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 552 WRLPVRAEETCGGSGTVTALR-RREV*QPSKRGELAAVRKPPARGAWR 412
           WR+ VRA E  GG G + A   RR V +    GE A VR+  A  AW+
Sbjct: 397 WRVGVRA-EVDGGDGVLRAAELRRRVEEVMGDGEAAEVRRSAA--AWK 441


>03_04_0007 + 16265360-16266982
          Length = 540

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 470 LQNEENLRRYANPLREERGGTRGEDLPRAHS-LYKAQNA 357
           ++ E   RR+A  +RE R    G++L RA + L +AQNA
Sbjct: 358 VETEMARRRHAESIREARSMADGKELERARTRLVEAQNA 396


>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
          Length = 883

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +2

Query: 449 ASSPRFEGC*TSLRRSAVTVPLPPHVSSARTGRRQWPRPLLAAPPVDRPR*WSPALS 619
           ASSP    C +S+  +     L PH+ + R    +   P  +APP   PR W+ +L+
Sbjct: 589 ASSPSAVPCTSSV--TLALRALTPHLRALRVSVPRPRAPSASAPPAAAPREWTVSLT 643


>09_06_0081 + 20745627-20748144,20748211-20748308
          Length = 871

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 512 LPPHVSSARTGRRQWPRPLLAAPPVDRP 595
           L PH+  +R      P PL+ APPV  P
Sbjct: 422 LAPHLHVSRASAPTVPTPLVPAPPVPTP 449


>05_01_0135 +
           908803-909059,913133-913187,913499-914047,914140-914365,
           914446-914906
          Length = 515

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 458 PRFEGC*TSLRRSAVTVPLPPHVSSARTGRRQWP-RPLLAAPPVD 589
           P FEGC  +L  + V   +P H+     GR++ P + +LAA   D
Sbjct: 284 PYFEGCIGALDGTHVPASVPAHMQDRFRGRKKSPTQNVLAAVDFD 328


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,818,248
Number of Sequences: 37544
Number of extensions: 241576
Number of successful extensions: 1013
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)