Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_G20
         (786 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U60181-1|AAC50654.1|  289|Homo sapiens growth hormone secretagog...    31   3.6  
BC069374-1|AAH69374.1|  289|Homo sapiens growth hormone secretag...    31   3.6  
BC069068-1|AAH69068.1|  289|Homo sapiens growth hormone secretag...    31   3.6  
AY322544-1|AAP84357.1|  289|Homo sapiens growth hormone secretag...    31   3.6  
AF369786-2|AAK71540.1|  289|Homo sapiens growth hormone secretag...    31   3.6  

>U60181-1|AAC50654.1|  289|Homo sapiens growth hormone secretagogue
           receptor type 1b protein.
          Length = 289

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 532 GGDVWRQRNGHGA--ATKRSLTTFKTRRTCGGTQTPCARSVAGPAARTCLGP 383
           G  +WR+R G     A+ R     +T +  GG+Q     S+AGP    CL P
Sbjct: 236 GRKLWRRRRGDAVVGASLRDQNHKQTVKMLGGSQRALRLSLAGPILSLCLLP 287


>BC069374-1|AAH69374.1|  289|Homo sapiens growth hormone
           secretagogue receptor protein.
          Length = 289

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 532 GGDVWRQRNGHGA--ATKRSLTTFKTRRTCGGTQTPCARSVAGPAARTCLGP 383
           G  +WR+R G     A+ R     +T +  GG+Q     S+AGP    CL P
Sbjct: 236 GRKLWRRRRGDAVVGASLRDQNHKQTVKMLGGSQRALRLSLAGPILSLCLLP 287


>BC069068-1|AAH69068.1|  289|Homo sapiens growth hormone
           secretagogue receptor protein.
          Length = 289

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 532 GGDVWRQRNGHGA--ATKRSLTTFKTRRTCGGTQTPCARSVAGPAARTCLGP 383
           G  +WR+R G     A+ R     +T +  GG+Q     S+AGP    CL P
Sbjct: 236 GRKLWRRRRGDAVVGASLRDQNHKQTVKMLGGSQRALRLSLAGPILSLCLLP 287


>AY322544-1|AAP84357.1|  289|Homo sapiens growth hormone secretagog
           receptor protein.
          Length = 289

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 532 GGDVWRQRNGHGA--ATKRSLTTFKTRRTCGGTQTPCARSVAGPAARTCLGP 383
           G  +WR+R G     A+ R     +T +  GG+Q     S+AGP    CL P
Sbjct: 236 GRKLWRRRRGDAVVGASLRDQNHKQTVKMLGGSQRALRLSLAGPILSLCLLP 287


>AF369786-2|AAK71540.1|  289|Homo sapiens growth hormone
           secretagogue receptor type 1b protein.
          Length = 289

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 532 GGDVWRQRNGHGA--ATKRSLTTFKTRRTCGGTQTPCARSVAGPAARTCLGP 383
           G  +WR+R G     A+ R     +T +  GG+Q     S+AGP    CL P
Sbjct: 236 GRKLWRRRRGDAVVGASLRDQNHKQTVKMLGGSQRALRLSLAGPILSLCLLP 287


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,218,146
Number of Sequences: 237096
Number of extensions: 1102064
Number of successful extensions: 3667
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3665
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)