Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_G17
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0310 - 8842286-8843314 35 0.085
09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800 33 0.20
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 31 1.4
01_06_0846 + 32408333-32408484,32408560-32408926,32409021-324093... 30 2.4
12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192 29 4.2
09_06_0240 + 21797458-21799369,21799636-21799784 29 4.2
08_01_1038 + 10540185-10540709 29 4.2
11_02_0104 + 8329231-8329902 29 5.6
11_02_0093 - 8238947-8239615 29 5.6
09_01_0128 + 1932721-1935181,1936099-1936256 29 5.6
08_02_0707 - 20212190-20214592 29 5.6
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 29 5.6
01_05_0698 + 24376193-24376708 29 5.6
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 5.6
10_06_0171 + 11466934-11466990,11467073-11468312,11468450-114685... 28 7.4
08_02_0964 - 23070624-23070860,23070970-23071250,23071353-23072124 28 7.4
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 28 7.4
02_05_0688 - 30918499-30919602 28 7.4
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 28 9.7
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 9.7
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 28 9.7
09_04_0619 - 19001350-19001359,19001737-19001800,19001955-190020... 28 9.7
06_03_1269 + 28865236-28865819,28866124-28866754 28 9.7
>02_02_0310 - 8842286-8843314
Length = 342
Score = 34.7 bits (76), Expect = 0.085
Identities = 14/57 (24%), Positives = 33/57 (57%)
Frame = +1
Query: 469 NHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRDRQQDGSSVK 639
+HH H+D++++++ + D A R + R H H+ +ED +++++G+ +K
Sbjct: 193 HHHHHHDENEEDEHEQADEASPAVERLISFHRRRHHHH---HHEDDHEQREEGAPMK 246
>09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800
Length = 863
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 282 PESCCVKKSILSTFAGNNCTVDAA 211
P SCCV+K I+S F NCT D A
Sbjct: 53 PASCCVRKIIVSNFLPLNCTKDEA 76
>06_03_1283 - 28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 439 ALAVGEEEDANHHLHNDDHQQEDC 510
++++ E D + H HN++H+ EDC
Sbjct: 969 SISIEESSDHHEHHHNEEHKAEDC 992
>01_06_0846 +
32408333-32408484,32408560-32408926,32409021-32409301,
32409877-32409931,32410137-32410331,32410417-32410569
Length = 400
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 555 IPRTRSRTLQPRRL*RSTGPTARWVFS*VFDHGSS-SSGTLLQSP 686
+ R LQP R+TGPT RW+ + SS ++GT Q P
Sbjct: 145 VQRAPHLPLQPLAHHRNTGPTKRWLLQFTYTGTSSQAAGTSSQGP 189
>12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192
Length = 283
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 252 LSTFAGNNCTVDAANPGCGPKI--GELYQKWNKPIAGVALGVACVEVVGALF 103
LST AG C + P CGP+ G Q+W + G VE++GALF
Sbjct: 111 LSTGAG--CAI-RPRPRCGPRARSGVAAQQWRHGRTVASEGRQSVELIGALF 159
>09_06_0240 + 21797458-21799369,21799636-21799784
Length = 686
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 252 LSTFAGNNCTVDAANPGCGPKIGELYQKWNK 160
++ N+C + A G G KI E+ Q WN+
Sbjct: 622 IAVLVKNHCANETAQDGLGFKIDEIVQAWNE 652
>08_01_1038 + 10540185-10540709
Length = 174
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 199 AAGIRGVDRAVVAGEGREDALLDATGLGQRELAVVDSASVTAAFELSLQFREDSLGG 369
+ G+ G + AVV EGR +++ G RE A + SASV A + RED GG
Sbjct: 104 SVGVVGEEAAVVRMEGRGGSVVADAG-SAREAAALASASVATA---AGSAREDDGGG 156
>11_02_0104 + 8329231-8329902
Length = 223
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 115 YHLNTSNTESNAGYRLVPFLVELADLGTAAGIRGV 219
+HLN S N GY V + AD GTAA G+
Sbjct: 63 FHLNASKYSGN-GYSTVCLKLHTADSGTAAAAGGI 96
>11_02_0093 - 8238947-8239615
Length = 222
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 115 YHLNTSNTESNAGYRLVPFLVELADLGTAAGIRGV 219
+HLN S N GY V + AD GTAA G+
Sbjct: 63 FHLNASKYSGN-GYSTVCLKLHAADSGTAAAAGGI 96
>09_01_0128 + 1932721-1935181,1936099-1936256
Length = 872
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +1
Query: 436 DALAVGEEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRDR 615
D A E+ + N+H+ ND +E+ H ++ +S+E+ E P + R
Sbjct: 232 DEAAEEEKCNGNNHVQNDARPEENDTEQMH----IKQNRSSEEKYREETRPKQGQCSRGA 287
Query: 616 QQDGSSV---KSLTMGP--VHQERYSNPHXQQAEELYYRST 723
DG +V SL M V+ + H + +E++ R +
Sbjct: 288 SNDGKTVLQHSSLNMEEMCVNLKHGKEKHQKHLKEIHVRGS 328
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.7 bits (61), Expect = 5.6
Identities = 38/164 (23%), Positives = 60/164 (36%), Gaps = 11/164 (6%)
Frame = +1
Query: 292 LAVVDSASVTAAFELSLQFREDSLGGLVCVSVRSLF----------E*HADAIHNALLDA 441
L +V + V +FE L+ RE S L+ VS+ L E H A + +
Sbjct: 440 LVLVGALIVLESFERILEPREISTSSLLTVSIGGLVVNVIGLVFFHEEHHHAHGGSCSHS 499
Query: 442 LAVGEEEDANH-HLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRDRQ 618
+ +H H H+ H ED DHA+ + A E + ++ D
Sbjct: 500 HSHSHSHSHSHSHSHSHVHGHEDHHNHDHALQGVNHNGACCEHHGDANKSHHHDHHHDSS 559
Query: 619 QDGSSVKSLTMGPVHQERYSNPHXQQAEELYYRSTXCCHGHKHQ 750
+ S SLT +E +S+ H ++ H HQ
Sbjct: 560 NEESHHNSLTENSC-KENHSHCHGHDHHHHHHHD----HSEHHQ 598
>03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 436 DALAVGEEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDD 594
DA G E+A H H C RDD V + +S+ +D++ DD
Sbjct: 1209 DAKNCGSGEEAGDHDSERTHGTLPCSRDDEPVHVPSDFGSSKSQDNQRDEDDD 1261
>01_05_0698 + 24376193-24376708
Length = 171
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 159 PIAGVALGVACVEVVGALFALCLANSIRNMDRRYA 55
P+AGV + A V V ALF CLA +R+ + A
Sbjct: 126 PVAGVLVMGADVAGVSALFGFCLAEYLRHNEAHAA 160
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 469 NHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRDRQQ 621
+HH DD E +DD + + S + R H H S D E+ R +
Sbjct: 823 HHHDTADDVSSERDEKDDSKKSRRHSSDRKKSRKHTHASDSDSENRHKRHK 873
>10_06_0171 +
11466934-11466990,11467073-11468312,11468450-11468596,
11469650-11470140
Length = 644
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 436 DALAVGEEEDANHHLHNDDHQQEDCVRDDHAV 531
D + EE+D +HH H+ H D +HA+
Sbjct: 320 DTFRIAEEDDDDHHHHHHYHGDADDDDGEHAM 351
>08_02_0964 - 23070624-23070860,23070970-23071250,23071353-23072124
Length = 429
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/24 (45%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -1
Query: 123 EVVGALFA-LCLANSIRNMDRRYA 55
E+ GA+FA +C NS++N+D R++
Sbjct: 334 EIHGAMFAAMCQKNSLKNLDSRFS 357
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 520 DHAVTLAYRSTASQERDHEHYSPDDYEDPRDRQQDGSSVK 639
DHA + R +S++R+HE + P+DR Q S++
Sbjct: 563 DHATSYESRGPSSRKRNHEE-GGSTVDKPQDRLQHADSIE 601
>02_05_0688 - 30918499-30919602
Length = 367
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 274 GLGQRELAVVDSASVTAAFELSLQFREDSLGGLVCVSVRSLFE*HADAIHNALLDAL 444
G+G+ AV S + FE+ FR D++ GL+ SVR+ E + N L D L
Sbjct: 101 GVGELRTAVAASFP-SLRFEI-YPFRADAVTGLISASVRAALEAPLNYARNYLADLL 155
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 31 SSRDVFILGVPSVHVSYGIGEAQREQG-SYHLNTSNTESN 147
S RD ILG PSV S + +E+ + HL T +E N
Sbjct: 526 SDRDTSILGCPSVTASMTTQVSSKEESKAQHLTTGYSEVN 565
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 454 EEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRDRQ 618
EEE A +LH ++ED V DD E D +HY+ + R +
Sbjct: 205 EEEKARGYLHPHHLKEEDEVDDDDDEREEEMHCGGWEDDDDHYASTTTSETRSEE 259
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +1
Query: 457 EEDANHHLHNDDHQQEDCVRD---DHAVTLAYRSTASQERDHEHYSPDDYEDPRDRQQD 624
+ED +HH D + + RD DH R ++RD + DYE RDR D
Sbjct: 331 KEDRHHHRDRDRTRDRERGRDRERDHGRDRD-RERDRRDRDRDRDRGRDYERDRDRGHD 388
>09_04_0619 -
19001350-19001359,19001737-19001800,19001955-19002099,
19002434-19002917,19003175-19003260,19003417-19003484,
19003565-19003709,19004561-19004677
Length = 372
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 220 DRAVVAGEGREDALLDATGLGQRELAVVDSASVT 321
D G G+E+ L+ATG+ E+ + D+ +T
Sbjct: 28 DHFTPVGAGQEELGLEATGIESNEIKIADTTEMT 61
>06_03_1269 + 28865236-28865819,28866124-28866754
Length = 404
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 592 RRGCNVRDRVLGMLWSDTRESLHGRHVRN 506
RR C+V D V +W ++HGR R+
Sbjct: 214 RRRCSVFDVVTAAIWQCRTRAIHGRRCRS 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,534,491
Number of Sequences: 37544
Number of extensions: 404368
Number of successful extensions: 1521
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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