Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_G16
(786 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 152 5e-38
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 42 1e-04
SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr 2|||Ma... 30 0.43
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 28 1.7
SPBC1709.09 |||mitochondrial translation termination factor|Schi... 27 2.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 5.3
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 7.0
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 26 7.0
SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51... 25 9.3
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 25 9.3
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 152 bits (369), Expect = 5e-38
Identities = 70/91 (76%), Positives = 82/91 (90%)
Frame = -3
Query: 718 RKELPPPKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLD 539
++ + KKGSITSVQA+YVPADDLTDPAPATTFAHLDATTVLSR+I+ELGIYPAVDPLD
Sbjct: 339 QERITTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVDPLD 398
Query: 538 STSRIMDPNIIGAEHYNVARGVQKILQDYKS 446
S SR+MDP I+G EHYN+A VQ++LQ+YKS
Sbjct: 399 SKSRMMDPRILGEEHYNLAGSVQQMLQEYKS 429
Score = 132 bits (320), Expect = 4e-32
Identities = 65/92 (70%), Positives = 76/92 (82%)
Frame = -1
Query: 444 LQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSK 265
LQDIIAILGMDELSE DKLTV RARK+QRFLSQPF VAEVFTG G+LV L++TI+ F +
Sbjct: 430 LQDIIAILGMDELSEADKLTVERARKVQRFLSQPFAVAEVFTGIEGRLVSLKDTIRSFKE 489
Query: 264 ILAGDYDHLPEVAFYMVGPIEEVVAKAETLAK 169
IL G +D LPE AFYMVG I++ V KAE +A+
Sbjct: 490 ILEGKHDSLPESAFYMVGSIDDAVKKAEKIAQ 521
Score = 56.0 bits (129), Expect = 6e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2
Query: 785 LLGRIPSAVGYQPTLATXHGTMQERITTTQE 693
LLGRIPSAVGYQPTLAT G MQERITTT++
Sbjct: 317 LLGRIPSAVGYQPTLATDMGAMQERITTTKK 347
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -3
Query: 697 KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 521
+ GSIT + + +P DD+T P P T + + R + IYP ++ L S SR+M
Sbjct: 322 RNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNNAIYPPINVLPSLSRLM 380
>SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 29.9 bits (64), Expect = 0.43
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -3
Query: 676 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA--VDPLDSTSRIMDPNIIG 503
+ I VP D P F + SR +A G P+ V+P +S ++I+D I
Sbjct: 91 IAIIGVPFDTAVSHRPGARFGPKGIRSASSRQMAIRGFNPSLNVNPYESWAKILDCGDIP 150
Query: 502 AEHYNVARGVQKILQDY 452
Y+ V+++ + Y
Sbjct: 151 VSSYDNQLAVRQMTEGY 167
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 27.9 bits (59), Expect = 1.7
Identities = 25/99 (25%), Positives = 40/99 (40%)
Frame = -3
Query: 715 KELPPPKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 536
K P GS+T++ I D++ P + D L + GI PA++ S
Sbjct: 339 KMSPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGIRPAINVGLS 398
Query: 535 TSRIMDPNIIGAEHYNVARGVQKILQDYKSPAGHYCYFG 419
SR+ + A VA ++ L Y+ A + FG
Sbjct: 399 VSRVGSAAQVKAMK-QVAGQIKLFLAQYREVAS-FAQFG 435
>SPBC1709.09 |||mitochondrial translation termination
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 2.3
Identities = 8/35 (22%), Positives = 20/35 (57%)
Frame = -3
Query: 700 PKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 596
P +G+ T ++A+++P+ + P P+ + A +
Sbjct: 84 PSQGNFTQLEALFIPSKSIKAPTPSRLLREIAAVS 118
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 545 RIHSWVDTQFSNGSRKYSGSIQVSK 619
R+ S DT F N KY ++Q+SK
Sbjct: 1331 RVESSSDTVFENTDLKYDNNVQMSK 1355
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 240 LPEVAFYMVGPIEEVVAKAETLAKNA*TGQYCVIILKSCRVIY*K 106
LP + +Y+ GP + V AK+ + N +C+ +++S R ++ K
Sbjct: 373 LPPIDYYLNGPYDNVEAKSALM--NI-YSSHCITLIESVRYMHLK 414
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1
Query: 486 LHVEFRKFFRTTNPLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 346
L + ++ + + + +II ++G LSE DK+T+ A I+ FL Q
Sbjct: 483 LRDQIKQIIQQEDSMLEIIQLVGKSALSETDKVTLDIAGIIKNDFLQQ 530
>SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51-b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 290 SSGTSLPACPVNTSATWKGCERNL*ILRARATVNLSSSDNSS 415
S G P+ S CE N +R R T ++ SSD S+
Sbjct: 130 SGGIQYSNVPLINSRVTPNCESNCSNIRRRLTAHIISSDAST 171
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 25.4 bits (53), Expect = 9.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 644 QVISWYINSLHRCDG 688
+ +SW++N+LH C G
Sbjct: 265 EFLSWFLNTLHNCLG 279
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,208,255
Number of Sequences: 5004
Number of extensions: 67943
Number of successful extensions: 163
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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