Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_G16
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 44 1e-04
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 42 4e-04
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 36 0.048
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 36 0.048
04_03_1003 - 21631188-21631274,21631939-21632043,21632171-216322... 33 0.26
07_03_1201 + 24791588-24792619 31 1.4
02_02_0179 + 7500647-7500779,7503021-7503222,7503356-7503427,750... 29 3.2
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 4.2
06_03_1214 + 28469848-28473048 29 4.2
11_04_0354 + 16697571-16700256,16700335-16700759 28 7.3
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 28 7.3
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 28 7.3
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 28 9.7
04_03_0624 - 18115559-18115725,18115993-18116872 28 9.7
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 28 9.7
02_01_0150 + 1063732-1064214,1064290-1064355,1064721-1064803,106... 28 9.7
01_06_1147 + 34892415-34893702,34894051-34894676 28 9.7
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 28 9.7
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -3
Query: 697 KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 521
+KGSIT + + +P DD+T P P T + + R + IYP ++ L S SR+M
Sbjct: 331 RKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLM 389
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -3
Query: 697 KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 521
+ GSIT + + +P DD+T P P T + + R + IYP ++ L S SR+M
Sbjct: 361 RSGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLM 419
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 703 PPKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSR 527
P + GS+T V A+ P D +DP + T + + L + +A+ +P+V+ L S S+
Sbjct: 418 PDRTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 476
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 703 PPKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSR 527
P + GS+T V A+ P D +DP + T + + L + +A+ +P+V+ L S S+
Sbjct: 404 PKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 462
>04_03_1003 -
21631188-21631274,21631939-21632043,21632171-21632248,
21632337-21632411,21632908-21632994,21633091-21633158,
21633478-21633565,21633684-21633784,21633831-21633990,
21635088-21635246,21635351-21635527
Length = 394
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 512 IGVHDTGC*VKRIHSWVDTQFSNGSRKYSGSIQVSKSGG---WSRISQVISWYINSL 673
+G HD+G K I W +NGS ++ ++ + G +SR +++W +N+L
Sbjct: 115 LGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRFLVAWLVNAL 171
>07_03_1201 + 24791588-24792619
Length = 343
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = -1
Query: 465 FFRTTNPLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL-- 292
++R + D + +L ++L D R + RF+ +PF AE G +V L
Sbjct: 221 YWRASVSRPDRVLLLRYEDLLR-DGAAGEHVRAMARFMGRPFSAAEEAAGAVASVVELCS 279
Query: 291 EETIKGFS---KILAGDYDHLPEVAFYMVG 211
E +K + AG Y +P AF+ G
Sbjct: 280 FERMKALEVNRRGTAGSYKSMPRDAFFRKG 309
>02_02_0179 +
7500647-7500779,7503021-7503222,7503356-7503427,
7503655-7503726,7504212-7504283,7504711-7504782,
7505045-7505116,7505209-7505280,7505688-7505759,
7506215-7506292,7506670-7506729,7506810-7506848,
7506949-7506998,7507110-7507480,7508467-7508662,
7508856-7508936,7509694-7509848,7510302-7510512,
7510648-7510882,7510995-7511145,7511813-7512181
Length = 944
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 703 PPKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVL 590
PP+ G+I S++ ++ A+D+T P +TF+ L T L
Sbjct: 172 PPEFGNIISLERFFISANDITGELP-STFSRLTNMTDL 208
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 311 ACPVNTSATWKGCERNL*ILRARATVNLSSSDNSSI 418
A P+ +S TWKG E L +++ R + + DN I
Sbjct: 42 AFPLVSSPTWKGIEHGLELVKQRIIWRVGNGDNIKI 77
>06_03_1214 + 28469848-28473048
Length = 1066
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/75 (22%), Positives = 31/75 (41%)
Frame = -1
Query: 486 LHVEFRKFFRTTNPLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAG 307
L + F KF +P + L +S+ + A +I R + + T G
Sbjct: 387 LRLAFNKFHGQLSPRMGTLKSLSFFSISDNHFTNITNALQILRSCKNLTSLL-IGTNFKG 445
Query: 306 KLVPLEETIKGFSKI 262
+ +P +ET+ GF +
Sbjct: 446 ETIPQDETVDGFENL 460
>11_04_0354 + 16697571-16700256,16700335-16700759
Length = 1036
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = -3
Query: 703 PPKKGSITSVQAIYVPADDLTDPAP 629
PP+ GS+T++ +Y+ +++L+ P P
Sbjct: 482 PPEVGSLTNLAYLYISSNNLSGPLP 506
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 646 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPL--DSTSRIMDPNIIGAEHYNVARGV 473
L + A T LDA+ L +A I + PL D S + PN GAE N+AR +
Sbjct: 514 LLESAEDTALDILDASDELGLFLARAVIDDVLAPLNLDEISGKLPPNCSGAETLNMARSL 573
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 311 ACPVNTSATWKGCERNL*ILR 373
A P NTS TWKG E L +L+
Sbjct: 440 AFPSNTSPTWKGIEHGLELLK 460
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 569 GYLPSCGSS*LNIPYHGPQYYWS*ALQCCTWSSE 468
GYL S + + G YY AL CCTWSS+
Sbjct: 361 GYLRVFDFSKEQLIFGGKSYYG--ALLCCTWSSD 392
>04_03_0624 - 18115559-18115725,18115993-18116872
Length = 348
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = +2
Query: 593 YSGSIQ---VSKSGGWSRISQVISWYI--NSLHRCDGTFLGW 703
Y+G+++ +S GW R+ IS Y ++LH D ++GW
Sbjct: 62 YAGNVELLNISLLEGWVRMRMPISNYCYNDTLHSMDENYIGW 103
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 279 KGFSKILAGD--YDHLPEVAFYMVGPIEEVVAK 187
KG +++AG + H FYM+ P EEVV K
Sbjct: 163 KGTERLVAGAQLFGHSTRQPFYMIQPSEEVVQK 195
>02_01_0150 +
1063732-1064214,1064290-1064355,1064721-1064803,
1065100-1065155,1065247-1066061
Length = 500
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = -1
Query: 477 EFRKFFRTTNPLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLV 298
E +K + +Q+ ++ ++ E + A + + R LS F+ ++ AG LV
Sbjct: 179 ETKKMLKHRYAMQEAKHLVCDKNVTVEQSIHTALSSQFVR-LSSYFK--KIHMSGAGNLV 235
Query: 297 PLEETIKGFSKILAGD 250
P+E +K SKI AG+
Sbjct: 236 PMEIALKVASKIAAGE 251
>01_06_1147 + 34892415-34893702,34894051-34894676
Length = 637
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 676 VQAIYVPADDLTDPAPATTFAHLDATTVLS 587
VQ + +PA L P P+ T LDA VLS
Sbjct: 71 VQTLRLPAVGLFGPLPSDTLGKLDALEVLS 100
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1
Query: 588 LEPLLNWVSTQLWI-----LLTQHPVSWTPILLELSTTMLHVEFRKFFRTTN 448
L P W+S ++I ++ V+W ++L + ML++ FRK++ +T+
Sbjct: 1077 LLPFFVWMSVSMYITVIGVVIMTCQVAWPSVVLVVPLLMLNLWFRKYYISTS 1128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,585,417
Number of Sequences: 37544
Number of extensions: 438053
Number of successful extensions: 1213
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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