Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_G04
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p...    67   1e-11
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p...    67   1e-11

>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
            protein C47E12.5b protein.
          Length = 1028

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 26/55 (47%), Positives = 41/55 (74%)
 Frame = -2

Query: 742  FKNGFVNLALPXFGFSEPIAPSTNTYNENKWTLWDRFEVKGEITLQQFLDHFKNE 578
            FKN F+NL++P F  +EPI     TY + ++TLWDR +V+G +TLQ+F+D+ +N+
Sbjct: 898  FKNTFLNLSMPFFSSAEPIGAPKKTYMDREFTLWDRIDVQGPLTLQEFIDNVQNQ 952



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = -1

Query: 470  VVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYVKYT 354
            V  ++ KK L P V+ALV E   +D DG DVEVPY++Y+
Sbjct: 989  VYEELLKKSLHPSVHALVLEPMMSDPDGEDVEVPYIRYS 1027



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -3

Query: 558  MLSQGVCMLYSFFMPKAKRLERL 490
            MLS G C+L+SFFM   K+ ERL
Sbjct: 960  MLSAGACLLFSFFMNAGKKQERL 982


>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
            protein C47E12.5a protein.
          Length = 1113

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 26/55 (47%), Positives = 41/55 (74%)
 Frame = -2

Query: 742  FKNGFVNLALPXFGFSEPIAPSTNTYNENKWTLWDRFEVKGEITLQQFLDHFKNE 578
            FKN F+NL++P F  +EPI     TY + ++TLWDR +V+G +TLQ+F+D+ +N+
Sbjct: 983  FKNTFLNLSMPFFSSAEPIGAPKKTYMDREFTLWDRIDVQGPLTLQEFIDNVQNQ 1037



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = -1

Query: 470  VVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYVKYT 354
            V  ++ KK L P V+ALV E   +D DG DVEVPY++Y+
Sbjct: 1074 VYEELLKKSLHPSVHALVLEPMMSDPDGEDVEVPYIRYS 1112



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -3

Query: 558  MLSQGVCMLYSFFMPKAKRLERL 490
            MLS G C+L+SFFM   K+ ERL
Sbjct: 1045 MLSAGACLLFSFFMNAGKKQERL 1067


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,073,595
Number of Sequences: 27780
Number of extensions: 294207
Number of successful extensions: 681
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)