Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_G03
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical pr...    40   0.003
Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical pr...    40   0.003
X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin pr...    40   0.003
U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory ...    40   0.003
Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical p...    39   0.004
Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z78200-11|CAB01587.2|  426|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z78198-13|CAB01575.2|  426|Caenorhabditis elegans Hypothetical p...    29   3.8  

>Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical
           protein C54C6.2 protein.
          Length = 444

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQGA 638
           TEAESNMNDLVSEY QYQ A
Sbjct: 409 TEAESNMNDLVSEYQQYQEA 428


>Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical
           protein B0272.1 protein.
          Length = 444

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQGA 638
           TEAESNMNDLVSEY QYQ A
Sbjct: 409 TEAESNMNDLVSEYQQYQEA 428


>X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin
           protein.
          Length = 441

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQGA 638
           TEAESNMNDLVSEY QYQ A
Sbjct: 409 TEAESNMNDLVSEYQQYQEA 428


>U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory
           abnormality protein7 protein.
          Length = 441

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQGA 638
           TEAESNMNDLVSEY QYQ A
Sbjct: 409 TEAESNMNDLVSEYQQYQEA 428


>Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical
           protein K01G5.7 protein.
          Length = 449

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQGA 638
           TEAESNMNDL+SEY QYQ A
Sbjct: 409 TEAESNMNDLISEYQQYQEA 428


>Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical
           protein C36E8.5 protein.
          Length = 450

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQGA 638
           TEAESNMNDL+SEY QYQ A
Sbjct: 409 TEAESNMNDLISEYQQYQEA 428


>Z78200-11|CAB01587.2|  426|Caenorhabditis elegans Hypothetical
           protein T04H1.9 protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQ 644
           T+AE+ +NDL+SE+ QY+
Sbjct: 404 TDAENKVNDLISEFQQYE 421


>Z78198-13|CAB01575.2|  426|Caenorhabditis elegans Hypothetical
           protein T04H1.9 protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = -2

Query: 697 TEAESNMNDLVSEYXQYQ 644
           T+AE+ +NDL+SE+ QY+
Sbjct: 404 TDAENKVNDLISEFQQYE 421


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,829,939
Number of Sequences: 27780
Number of extensions: 54318
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)