Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_G02
(735 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14663-1|BAA03497.1| 389|Homo sapiens KIAA0107 protein. 50 7e-06
BC012369-1|AAH12369.1| 389|Homo sapiens proteasome (prosome, ma... 50 7e-06
BC000904-1|AAH00904.1| 389|Homo sapiens proteasome (prosome, ma... 50 7e-06
BC000630-1|AAH00630.1| 389|Homo sapiens proteasome (prosome, ma... 50 7e-06
AY568086-1|AAS68366.1| 389|Homo sapiens breast cancer associate... 50 7e-06
AY359879-1|AAQ63402.1| 351|Homo sapiens KIAA0107 isoform protein. 50 7e-06
AF530062-1|AAQ09946.1| 389|Homo sapiens phosphonoformate immuno... 50 7e-06
AF215935-1|AAF65540.1| 389|Homo sapiens proteasome regulatory p... 50 7e-06
AK057456-1|BAB71495.1| 166|Homo sapiens protein ( Homo sapiens ... 31 4.3
X74796-1|CAA52803.1| 617|Homo sapiens p85Mcm protein protein. 30 7.5
D55716-1|BAA09534.1| 719|Homo sapiens P1cdc47 protein. 30 7.5
BC013375-1|AAH13375.1| 719|Homo sapiens minichromosome maintena... 30 7.5
BC009398-1|AAH09398.1| 389|Homo sapiens MCM7 protein protein. 30 7.5
>D14663-1|BAA03497.1| 389|Homo sapiens KIAA0107 protein.
Length = 389
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 339 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 388
>BC012369-1|AAH12369.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 6 protein.
Length = 389
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 339 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 388
>BC000904-1|AAH00904.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 6 protein.
Length = 389
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 339 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 388
>BC000630-1|AAH00630.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 6 protein.
Length = 389
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 339 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 388
>AY568086-1|AAS68366.1| 389|Homo sapiens breast cancer associated
protein SGA-113M protein.
Length = 389
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 339 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 388
>AY359879-1|AAQ63402.1| 351|Homo sapiens KIAA0107 isoform protein.
Length = 351
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 301 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 350
>AF530062-1|AAQ09946.1| 389|Homo sapiens phosphonoformate
immuno-associated protein 4 protein.
Length = 389
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 339 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 388
>AF215935-1|AAF65540.1| 389|Homo sapiens proteasome regulatory
particle subunit p44S10 protein.
Length = 389
Score = 50.4 bits (115), Expect = 7e-06
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
AAGRL C+ID V V T D+ Q YQ TI++GDLLLNRV+KL+ VIN
Sbjct: 339 AAGRLHCKIDKVNEIVETNR---PDSKNWQ-YQETIKKGDLLLNRVQKLSRVIN 388
>AK057456-1|BAB71495.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ32894 fis, clone TESTI2004994. ).
Length = 166
Score = 31.1 bits (67), Expect = 4.3
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 104 SKSPSRIVAWYSCDRSASAPR-PAPVTTQPATASMRH*R 217
S SPS V W SC SASAPR P P P + +H R
Sbjct: 107 SSSPSHRVPWGSC-ASASAPRLPVPHPPSPLSKCPQHPR 144
>X74796-1|CAA52803.1| 617|Homo sapiens p85Mcm protein protein.
Length = 617
Score = 30.3 bits (65), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 65 KLITLASFLTRLRSKSPSRIVAWYSCDR 148
KL+T+ +TR+ P +VA Y+CD+
Sbjct: 57 KLVTVRGIVTRVSEVKPKMVVATYTCDQ 84
>D55716-1|BAA09534.1| 719|Homo sapiens P1cdc47 protein.
Length = 719
Score = 30.3 bits (65), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 65 KLITLASFLTRLRSKSPSRIVAWYSCDR 148
KL+T+ +TR+ P +VA Y+CD+
Sbjct: 159 KLVTVRGIVTRVSEVKPKMVVATYTCDQ 186
>BC013375-1|AAH13375.1| 719|Homo sapiens minichromosome maintenance
complex component 7 protein.
Length = 719
Score = 30.3 bits (65), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 65 KLITLASFLTRLRSKSPSRIVAWYSCDR 148
KL+T+ +TR+ P +VA Y+CD+
Sbjct: 159 KLVTVRGIVTRVSEVKPKMVVATYTCDQ 186
>BC009398-1|AAH09398.1| 389|Homo sapiens MCM7 protein protein.
Length = 389
Score = 30.3 bits (65), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 65 KLITLASFLTRLRSKSPSRIVAWYSCDR 148
KL+T+ +TR+ P +VA Y+CD+
Sbjct: 159 KLVTVRGIVTRVSEVKPKMVVATYTCDQ 186
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,895,896
Number of Sequences: 237096
Number of extensions: 750777
Number of successful extensions: 1427
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -