Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_G02
         (735 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052008-1|AAK93432.1|  389|Drosophila melanogaster LD47143p pro...    52   8e-07
AF145308-1|AAF08389.1|  389|Drosophila melanogaster 26S proteaso...    52   8e-07
AE014297-3158|AAF56000.1|  389|Drosophila melanogaster CG5378-PA...    52   8e-07
BT001526-1|AAN71281.1|  720|Drosophila melanogaster RE04406p pro...    32   0.93 
AF124743-1|AAD32857.1|  720|Drosophila melanogaster DNA replicat...    32   0.93 
AE014296-1533|AAF50357.1|  720|Drosophila melanogaster CG4978-PA...    32   0.93 
AB010109-1|BAA34733.1|  717|Drosophila melanogaster MCM7 protein.      32   0.93 
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    30   3.8  

>AY052008-1|AAK93432.1|  389|Drosophila melanogaster LD47143p
           protein.
          Length = 389

 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -1

Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
           AAGRL  ++D V G V T        +++  YQATI++GDLLLNR++KL+ VIN
Sbjct: 339 AAGRLHAKVDRVGGIVETNR----PDNKNWQYQATIKQGDLLLNRIQKLSRVIN 388


>AF145308-1|AAF08389.1|  389|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p42A protein.
          Length = 389

 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -1

Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
           AAGRL  ++D V G V T        +++  YQATI++GDLLLNR++KL+ VIN
Sbjct: 339 AAGRLHAKVDRVGGIVETNR----PDNKNWQYQATIKQGDLLLNRIQKLSRVIN 388


>AE014297-3158|AAF56000.1|  389|Drosophila melanogaster CG5378-PA
           protein.
          Length = 389

 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -1

Query: 228 AAGRLQCRIDAVAGCVVTGAGRGADADRSQLYQATIREGDLLLNRVKKLASVIN 67
           AAGRL  ++D V G V T        +++  YQATI++GDLLLNR++KL+ VIN
Sbjct: 339 AAGRLHAKVDRVGGIVETNR----PDNKNWQYQATIKQGDLLLNRIQKLSRVIN 388


>BT001526-1|AAN71281.1|  720|Drosophila melanogaster RE04406p
           protein.
          Length = 720

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 65  KLITLASFLTRLRSKSPSRIVAWYSCDRSAS 157
           KL+T+   +TR     P  +VA Y+CDR  S
Sbjct: 159 KLVTVRGIVTRCTEVKPMMVVATYTCDRCGS 189


>AF124743-1|AAD32857.1|  720|Drosophila melanogaster DNA replication
           factor MCM7 protein.
          Length = 720

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 65  KLITLASFLTRLRSKSPSRIVAWYSCDRSAS 157
           KL+T+   +TR     P  +VA Y+CDR  S
Sbjct: 159 KLVTVRGIVTRCTEVKPMMVVATYTCDRCGS 189


>AE014296-1533|AAF50357.1|  720|Drosophila melanogaster CG4978-PA
           protein.
          Length = 720

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 65  KLITLASFLTRLRSKSPSRIVAWYSCDRSAS 157
           KL+T+   +TR     P  +VA Y+CDR  S
Sbjct: 159 KLVTVRGIVTRCTEVKPMMVVATYTCDRCGS 189


>AB010109-1|BAA34733.1|  717|Drosophila melanogaster MCM7 protein.
          Length = 717

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 65  KLITLASFLTRLRSKSPSRIVAWYSCDRSAS 157
           KL+T+   +TR     P  +VA Y+CDR  S
Sbjct: 159 KLVTVRGIVTRCTEVKPMMVVATYTCDRCGS 189


>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
           protein.
          Length = 1161

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 74  TLASFLTRLRSKSPSRIVAWYSCDRSASAPRPAPVTTQPAT 196
           TLA+  T  RS S S      +   +A++P P+  TT+P T
Sbjct: 357 TLATSKTTSRSSSSSTTTTTMATSTTATSPSPSTTTTKPRT 397


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,933,169
Number of Sequences: 53049
Number of extensions: 213152
Number of successful extensions: 634
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)