Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_G01
(719 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 3.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.7
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 416 LXVIPVWENNKLLYKIXNTEYTMYPEAGHERRRVRRQESVGF 291
+ + WE + L+ TE+ + P ER RRQE + +
Sbjct: 568 INTVAEWEPPRALWP---TEWKVRPSTVEEREEFRRQERMRY 606
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 301 AWGSNNSNEKGHLWKLTP 248
AW +N K LW L P
Sbjct: 88 AWAKHNPRGKDALWSLVP 105
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 95 HQRVAVELHINSDTLPG 45
HQ V V +NSD PG
Sbjct: 258 HQPVTVNRQLNSDVQPG 274
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 329 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRXESEAGRARGQ 165
E R RR+E + Q+ ERE ++ + +R ++ R +S + +RG+
Sbjct: 33 EERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,304
Number of Sequences: 438
Number of extensions: 3039
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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