Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_F24
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778...    29   4.2  
04_04_0254 - 23951495-23951902,23952000-23952155,23952344-239524...    28   7.3  

>05_03_0468 +
           14376926-14377183,14377534-14377710,14377802-14377867,
           14378009-14378134,14378499-14378678,14379015-14379179,
           14380185-14380538
          Length = 441

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 414 RPNRXPRQFPHHHXGHLPSCXPTKP 488
           +P + P    HHH  H PS  P+ P
Sbjct: 8   QPPQTPPSLDHHHHHHTPSVGPSSP 32


>04_04_0254 -
           23951495-23951902,23952000-23952155,23952344-23952485,
           23952772-23953160,23953833-23953948,23954290-23954371
          Length = 430

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 432 RQFPHHHXGHLPSCXPTKPGFSTGSSL 512
           R  P HH GHL S   T  GFS+  SL
Sbjct: 312 RHIPEHHHGHLKSVKIT--GFSSAKSL 336


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,331,822
Number of Sequences: 37544
Number of extensions: 167345
Number of successful extensions: 425
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)