Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_F23
         (801 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1251 + 28749558-28749818,28749953-28750146,28750269-28750695     32   0.46 
08_02_0253 - 14869109-14869146,14869424-14869710,14869848-14870167     31   1.1  
08_01_0869 + 8487518-8487697,8487792-8488127,8488211-8488410,848...    31   1.4  
06_03_1253 + 28761311-28761598,28761689-28761882,28762327-28762711     31   1.4  
06_03_1252 + 28753584-28753883,28754693-28754886,28755192-28755597     31   1.4  
04_04_1063 - 30507734-30508127,30508248-30508447,30508559-30508846     30   1.9  
10_05_0068 + 8774712-8774787,8774812-8774852,8774895-8775743,877...    30   2.5  
04_04_1064 - 30516378-30516735,30516852-30517051,30517148-30517411     29   3.3  
04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122     29   4.3  
04_01_0470 - 6062054-6062134,6062262-6062528,6062578-6062583           29   5.7  
03_01_0121 + 940338-940637,941023-941324,941417-941969,943889-94...    29   5.7  
06_03_1254 - 28773066-28773489,28773580-28773773,28773849-28774103     28   9.9  
03_02_0207 - 6411324-6412895                                           28   9.9  
02_04_0443 - 22969690-22969700,22970561-22970642,22971484-229716...    28   9.9  

>06_03_1251 + 28749558-28749818,28749953-28750146,28750269-28750695
          Length = 293

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 646 SFHTYSVQWTPDFIALSVDG 587
           SFHTYS+ W P  +  +VDG
Sbjct: 138 SFHTYSIIWNPQHVIFAVDG 157


>08_02_0253 - 14869109-14869146,14869424-14869710,14869848-14870167
          Length = 214

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 25/90 (27%), Positives = 38/90 (42%)
 Frame = -3

Query: 601 LSVDGEEWARVEAPRDALPAVCAHAPRHLLQAGSQMAPFDDHFYITLGVAAGGITEFRDG 422
           +++ G  ++ VEAP   LPA   H    +L  G+ +    DH  +   +      E  D 
Sbjct: 24  VNIQGTSFSTVEAPGPWLPA---HTTNGILLHGA-VGGDGDHVAVVGRLDFLADREGDDV 79

Query: 421 SITSGGVTKPWRDSARKASVHFWRHMSDWF 332
            +   G  +PWR   R+ S H  R    WF
Sbjct: 80  DVVMDG-PRPWRGLLRRPSRHGSRQQVTWF 108


>08_01_0869 +
           8487518-8487697,8487792-8488127,8488211-8488410,
           8488586-8488973
          Length = 367

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 649 DSFHTYSVQWTPDFIALSVDG 587
           + FHTY++ W P  I + VDG
Sbjct: 224 EDFHTYTIIWNPQMILILVDG 244


>06_03_1253 + 28761311-28761598,28761689-28761882,28762327-28762711
          Length = 288

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -3

Query: 643 FHTYSVQWTPDFIALSVDG 587
           FHTYSV W P  I   VDG
Sbjct: 148 FHTYSVLWNPSHILFYVDG 166


>06_03_1252 + 28753584-28753883,28754693-28754886,28755192-28755597
          Length = 299

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -3

Query: 679 KRRRDGTSWGD---SFHTYSVQWTPDFIALSVDG 587
           +R +    W D    FHTYS+ W P  I L +DG
Sbjct: 137 EREQQFVLWFDPTADFHTYSILWNPHNIILYIDG 170


>04_04_1063 - 30507734-30508127,30508248-30508447,30508559-30508846
          Length = 293

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3

Query: 643 FHTYSVQWTPDFIALSVD 590
           FHTYSV W PD I + VD
Sbjct: 150 FHTYSVIWNPDEILILVD 167


>10_05_0068 +
           8774712-8774787,8774812-8774852,8774895-8775743,
           8776210-8776582,8776814-8777484
          Length = 669

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 718 IMDLEXRENFLSTKRRRDGTSWGDSFHTYSVQWTPDFIA---LSVDGEEWARVEAPRDAL 548
           + DL+  E    +KR+R   S+GD F  Y +  TP  I+    S D + W   EA R  +
Sbjct: 319 LTDLDVSEAPRRSKRQRTAKSFGDDFTVYLMDDTPKSISEAYASPDADYWK--EAVRSEM 376

Query: 547 PAV 539
            ++
Sbjct: 377 DSI 379


>04_04_1064 - 30516378-30516735,30516852-30517051,30517148-30517411
          Length = 273

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 643 FHTYSVQWTPDFIALSVDG 587
           FHTYS+ WT   I + VDG
Sbjct: 142 FHTYSIVWTSQHILVLVDG 160


>04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122
          Length = 294

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 643 FHTYSVQWTPDFIALSVDGE 584
           +HTYS+ W P  I + VDG+
Sbjct: 154 YHTYSIVWNPKRILILVDGK 173


>04_01_0470 - 6062054-6062134,6062262-6062528,6062578-6062583
          Length = 117

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
 Frame = +2

Query: 404 SPGGYRPVAELRYASCRHA*RYVEVVIEWR---HLRAGLQQVPRGVRADSRQGVPWRLHS 574
           SP  +RP      ++   + R+           + R   +  PR   A SR G PW  H 
Sbjct: 37  SPNSWRPPHMATISAMSESLRFTNATDSLNSGCNARVTWEMAPRETLAASRSGSPWSAHD 96

Query: 575 RPLLAVHR 598
              L  HR
Sbjct: 97  EVSLGDHR 104


>03_01_0121 +
           940338-940637,941023-941324,941417-941969,943889-944848
          Length = 704

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 649 DSFHTYSVQWTPDFIALSVDGEEWARVE 566
           D FH Y++ W  D I   +DGE   R E
Sbjct: 533 DGFHHYAIAWGADAIEWRIDGELIRREE 560


>06_03_1254 - 28773066-28773489,28773580-28773773,28773849-28774103
          Length = 290

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 643 FHTYSVQWTPDFIALSVD 590
           FHTYS+ W P  I   VD
Sbjct: 137 FHTYSILWNPKHIIFMVD 154


>03_02_0207 - 6411324-6412895
          Length = 523

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 448 GGITEFRDGSITSGGVTKPWRDSARKASVHFWRHMSDWFPR 326
           G + E  DGS  SG     +RD+A  ++  F R+   WF R
Sbjct: 209 GALAEADDGSTASGRFADAFRDAANLSAGRF-RYAVPWFWR 248


>02_04_0443 -
           22969690-22969700,22970561-22970642,22971484-22971601,
           22973513-22973740,22973948-22974231
          Length = 240

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -1

Query: 573 EWRRHGTPCRLSARTPRGTCCRPARRWRHSMTTST*R*AWRQEA 442
           +WRRHG   RL+     G      R W H       R AWR+EA
Sbjct: 120 DWRRHGGLRRLAEGVADG------RTWLHGSDWRGRRPAWRREA 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,045,123
Number of Sequences: 37544
Number of extensions: 428153
Number of successful extensions: 1324
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)