Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_F20
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   194   5e-50
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   194   5e-50
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   194   5e-50
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ...    29   5.1  
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related...    29   5.1  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  194 bits (474), Expect = 5e-50
 Identities = 90/108 (83%), Positives = 99/108 (91%)
 Frame = -2

Query: 577 NPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIAD 398
           NPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHRSGETEDTFIAD
Sbjct: 356 NPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIAD 415

Query: 397 LVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 254
           LVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 416 LVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 463



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 25/47 (53%), Positives = 28/47 (59%)
 Frame = -1

Query: 713 LFGTSSKXSPWCPIGDPFDQDDWSAWANLTGRTPIQIVGDDLTVTKP 573
           L+ +  K  P   I D FDQDDW  W    G T IQ+VGDDLTVT P
Sbjct: 311 LYQSFIKEYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNP 357


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  194 bits (474), Expect = 5e-50
 Identities = 90/108 (83%), Positives = 99/108 (91%)
 Frame = -2

Query: 577 NPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIAD 398
           NPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHRSGETEDTFIAD
Sbjct: 228 NPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIAD 287

Query: 397 LVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 254
           LVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 288 LVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 335



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 25/47 (53%), Positives = 28/47 (59%)
 Frame = -1

Query: 713 LFGTSSKXSPWCPIGDPFDQDDWSAWANLTGRTPIQIVGDDLTVTKP 573
           L+ +  K  P   I D FDQDDW  W    G T IQ+VGDDLTVT P
Sbjct: 183 LYQSFIKEYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNP 229


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  194 bits (474), Expect = 5e-50
 Identities = 90/108 (83%), Positives = 99/108 (91%)
 Frame = -2

Query: 577 NPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIAD 398
           NPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHRSGETEDTFIAD
Sbjct: 325 NPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIAD 384

Query: 397 LVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 254
           LVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 385 LVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 432



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 25/47 (53%), Positives = 28/47 (59%)
 Frame = -1

Query: 713 LFGTSSKXSPWCPIGDPFDQDDWSAWANLTGRTPIQIVGDDLTVTKP 573
           L+ +  K  P   I D FDQDDW  W    G T IQ+VGDDLTVT P
Sbjct: 280 LYQSFIKEYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNP 326


>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
           repeats, ras-likedomain, kinase protein 1 protein.
          Length = 2395

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 288 TPNTPGRTSVDRSKNSLKKT*N-SVFLSYPHFDSNKKVVLTMFVLNKQFNAYHVLQDCSE 112
           T N   R +V ++  +L K  + S+F  +P   SN     T+  +N  FN +H    C  
Sbjct: 685 TSNPLRRQNVWQASINLSKVDDDSLFPDFPVTSSN-----TLTTINLSFNKFHTFPFCLA 739

Query: 111 CAC 103
           C C
Sbjct: 740 CTC 742


>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
           kinase protein.
          Length = 2393

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 288 TPNTPGRTSVDRSKNSLKKT*N-SVFLSYPHFDSNKKVVLTMFVLNKQFNAYHVLQDCSE 112
           T N   R +V ++  +L K  + S+F  +P   SN     T+  +N  FN +H    C  
Sbjct: 683 TSNPLRRQNVWQASINLSKVDDDSLFPDFPVTSSN-----TLTTINLSFNKFHTFPFCLA 737

Query: 111 CAC 103
           C C
Sbjct: 738 CTC 740


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,171,538
Number of Sequences: 27780
Number of extensions: 328662
Number of successful extensions: 744
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)