Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_F17
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0057 + 25253497-25253589,25253722-25253799,25254583-252546... 38 0.012
11_01_0489 + 3776563-3776692,3776995-3777073,3777532-3777840,377... 33 0.26
08_02_0785 + 21190002-21190253,21190452-21190523,21191498-211916... 32 0.59
05_03_0244 + 10857139-10857516 31 1.4
05_03_0245 + 10890555-10890962 30 2.4
04_04_1676 - 35302498-35302836,35302911-35302997,35303063-353032... 30 2.4
09_04_0455 + 17728007-17728542,17728697-17728783,17729052-177292... 29 3.2
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 29 4.2
08_02_0588 + 19036509-19039235 29 5.5
09_04_0635 - 19143721-19145165,19145255-19145306 28 7.3
03_02_0356 + 7769153-7769285,7769367-7769485,7769821-7770129 28 7.3
10_05_0096 - 9144683-9145270 28 9.6
06_01_0175 - 1371089-1371706,1371812-1371994,1372069-1372324,137... 28 9.6
06_01_0173 - 1364219-1364836,1364941-1365123,1365215-1365470,136... 28 9.6
04_04_1073 - 30606472-30606515,30606897-30606988,30607152-306072... 28 9.6
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 28 9.6
02_01_0382 - 2772378-2773544 28 9.6
>05_06_0057 +
25253497-25253589,25253722-25253799,25254583-25254621,
25254724-25255263,25255352-25255450,25255614-25255691,
25255961-25256146,25256240-25256365
Length = 412
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -2
Query: 213 LIMQVLQLSDEQIALLPPEQRASILLLKEQI 121
L+ QVL +S +QI +LPPEQR +L L++ +
Sbjct: 380 LVQQVLSMSPDQINMLPPEQRQQVLQLRDML 410
>11_01_0489 +
3776563-3776692,3776995-3777073,3777532-3777840,
3778828-3778898,3778975-3779213,3779306-3779383,
3779734-3780156,3780416-3780661,3780886-3780978,
3781480-3781527
Length = 571
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -2
Query: 249 IPSGASDQEKAALIMQVLQLSDEQIALLPPEQRASIL 139
+P D E +AL+ QVLQL+ EQ++ LP EQ+ +L
Sbjct: 523 VPQLTPDVE-SALLQQVLQLTPEQLSSLPVEQQQQLL 558
>08_02_0785 +
21190002-21190253,21190452-21190523,21191498-21191631,
21191700-21191850,21191938-21192087
Length = 252
Score = 31.9 bits (69), Expect = 0.59
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 620 HHQHNHRYTIIPDRHPTSTTIPVRPWMLIF 531
H + H YT +P HP TTI +R +++
Sbjct: 107 HEPYKHGYTALPRAHPDETTIDIRQASILY 136
>05_03_0244 + 10857139-10857516
Length = 125
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 269 CAALGMPGGICCGGFC 316
C A+G PG CCGG C
Sbjct: 53 CLAVGSPGATCCGGRC 68
>05_03_0245 + 10890555-10890962
Length = 135
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 269 CAALGMPGGICCGGFC 316
C A G PG CCGG C
Sbjct: 62 CLAAGSPGATCCGGRC 77
>04_04_1676 -
35302498-35302836,35302911-35302997,35303063-35303286,
35303375-35303675,35303762-35303860,35304895-35305032,
35305108-35305326
Length = 468
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = -1
Query: 451 AGRPAPGTAADASSPRS*LPERSAVGQCSTVQPGS---EGAFKRSTKPAETA---TANAS 290
A PAP SSP + PE + S V+P S E T PA+TA ++N S
Sbjct: 383 AAAPAPAPEMAPSSPPAEPPETATEAAGSAVRPASIKLEKDDTTGTSPADTAKSSSSNRS 442
Query: 289 WHAERCT 269
H C+
Sbjct: 443 PHPSSCS 449
>09_04_0455 +
17728007-17728542,17728697-17728783,17729052-17729290,
17729368-17729486,17729594-17729680,17729758-17729805
Length = 371
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 553 TGIVVLVGWRSGIIVYRWLCWWWIGWYISIRLGW 654
+G+ + GW++ + C+++IG I + LGW
Sbjct: 287 SGVAIGSGWQAAVAYVNIGCYYFIGVPIGVLLGW 320
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 155 NAPVYSC*KNKSRRAHSSVRNKNRANRFLCNSCNL 51
N P Y + S +S RNK R R+L N C++
Sbjct: 365 NTPKYGLIFHSSFIGRASTRNKGRIARYLANKCSI 399
>08_02_0588 + 19036509-19039235
Length = 908
Score = 28.7 bits (61), Expect = 5.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 604 WLCWWWIGWYISIRLGW 654
W WWW W+ ++ GW
Sbjct: 17 WAWWWWWWWWGDLQGGW 33
>09_04_0635 - 19143721-19145165,19145255-19145306
Length = 498
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 376 GQCSTVQPGSEGAFKRSTKPAETATA-NASWHAERCTG 266
G C +QPG E F+ +T A + A N+ W R TG
Sbjct: 416 GTCDAIQPGGE-CFRPNTTAAHASYAFNSYWQQLRKTG 452
>03_02_0356 + 7769153-7769285,7769367-7769485,7769821-7770129
Length = 186
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 125 CSFSRSILARCSGGNKAICSSDNCSTCIINAAFS*SEAP 241
CS++ S +A + G+KAI + C C AA + ++AP
Sbjct: 93 CSYNLSYMAVTTTGSKAIAVAFLCIACFALAAGAAADAP 131
>10_05_0096 - 9144683-9145270
Length = 195
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = -3
Query: 614 QHNHRYTIIPDRHPTSTTIPVRPWMLIF-AGRELPVPR----RPL-TPCPRCST-RTCA 459
Q NHRY P H T + V L F +G+ VP P PCPR ST R C+
Sbjct: 96 QGNHRYPAFPVLHTTYYLVLVLVRALRFSSGKSQVVPSAARLHPFGRPCPRYSTSRPCS 154
>06_01_0175 -
1371089-1371706,1371812-1371994,1372069-1372324,
1372407-1372976,1373423-1373529,1373664-1374136,
1374279-1374372
Length = 766
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 565 VLVGWRSGIIVYRWLCWWW 621
+LVG+ SG +VYR+ WW
Sbjct: 685 ILVGFLSGYVVYRYRRDWW 703
>06_01_0173 -
1364219-1364836,1364941-1365123,1365215-1365470,
1365551-1366120,1367066-1367178,1367344-1367816,
1367906-1367984
Length = 763
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 565 VLVGWRSGIIVYRWLCWWW 621
+LVG+ SG +VYR+ WW
Sbjct: 682 ILVGFLSGYVVYRYRRDWW 700
>04_04_1073 - 30606472-30606515,30606897-30606988,30607152-30607243,
30607362-30607469,30607614-30607748,30607826-30607871,
30608320-30608420,30608512-30608649,30608721-30608819,
30608920-30609036,30609941-30610102,30610271-30610330,
30611120-30611216,30611238-30611296,30611364-30611480,
30611922-30612020,30612115-30612180,30612405-30612542,
30612659-30612742,30612820-30612892,30612937-30612992,
30613074-30613182,30613253-30613335,30613406-30613489,
30613679-30613750,30613827-30613904,30613984-30614067,
30614142-30614212,30614497-30614566,30614866-30614955,
30615046-30615177,30615250-30615350,30615634-30615691,
30615762-30615878,30617981-30618133
Length = 1094
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 545 WMLIFAGRELPVPRRPL 495
W L F G+ +PVP RPL
Sbjct: 1051 WPLAFVGKLIPVPERPL 1067
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 155 NAPVYSC*KNKSRRAHSSVRNKNRANRFLCNSCNL 51
N P Y + S +S +NK R R+L N C++
Sbjct: 347 NTPKYGLIFHSSFIGRASTKNKGRMARYLANKCSI 381
>02_01_0382 - 2772378-2773544
Length = 388
Score = 27.9 bits (59), Expect = 9.6
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = -1
Query: 442 PAPGTAADASSPRS*LPERSAVGQCSTVQPGSEGAFKRSTKPAETATANASWHAERCTG* 263
P A+ ++SP RSA G+ T P S A +R + + A+AS A
Sbjct: 4 PKQPMASSSTSPSPSRLPRSASGKAPTSPPSSSNASRRHHQ--QPPRASASTPATPAPSR 61
Query: 262 EHSR-YSIGCF*SREGRVDNASAAVIRRTDRFVTARTTRQYT 140
H R SI C R D++ D+ TA+ Y+
Sbjct: 62 HHLRSLSISCMTIRTD--DDSPPPAATHKDKAATAKPLSYYS 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,116,465
Number of Sequences: 37544
Number of extensions: 405827
Number of successful extensions: 1388
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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