Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_F17
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    38   0.006
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    28   8.7  
Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    28   8.7  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 15/42 (35%), Positives = 29/42 (69%)
 Frame = -2

Query: 231 DQEKAALIMQVLQLSDEQIALLPPEQRASILLLKEQIAKSTQ 106
           +Q+ A L+MQV+QLS+  + +LP   R  I+ L++Q+ ++ +
Sbjct: 295 EQQNAELLMQVMQLSEHDLQMLPAGDREKIIELRQQLKRNVK 336


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 635 IYHPIHHQHNHRYTIIPDRHPTSTTIPVRP 546
           I+H  HH H+H  T       T+TT  V P
Sbjct: 188 IHHQHHHHHHHTTTTPSTTTSTTTTTTVAP 217


>Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical
           protein K07C5.4 protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 158 NNAPVYSC*KNKSRRAHSSVRNKNRANRFLCNSCNL 51
           +N P Y    + S    +  +NK R +R+L N C++
Sbjct: 349 SNTPKYGLLFHSSFIGKAGTKNKGRVSRYLANKCSI 384


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = -3

Query: 668 YRVINQPKRILIYHPIHHQHNHRYTIIPDRHPTSTTIPV--RPWMLIFAGRELPVPRRPL 495
           Y    QP   +IY P         T +P + P    + V  +P  +I  G ++     P 
Sbjct: 17  YAEAQQPPPTIIYPP---------TQMPQQGPGQGPVYVVQQPQEIIIVGTKMAPSFEPY 67

Query: 494 TP-CPRCSTRTC 462
           T  CPRC+T  C
Sbjct: 68  TEFCPRCNTNVC 79


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 635 IYHPIHHQHNHRYTIIPDRHPTSTTIPVRP 546
           I+H  HH H+H  T       T+TT  V P
Sbjct: 188 IHHQHHHHHHHTTTTPSTTTSTTTTTTVAP 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,341,203
Number of Sequences: 27780
Number of extensions: 317024
Number of successful extensions: 990
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)