Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_F16
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013427-1|AAH13427.2|  253|Homo sapiens PUS3 protein protein.         85   3e-16
BC004822-1|AAH04822.1|  481|Homo sapiens pseudouridylate synthas...    85   3e-16
AK055702-1|BAB70990.1|  481|Homo sapiens protein ( Homo sapiens ...    85   3e-16
AF494208-1|AAM74077.1|  739|Homo sapiens interleukin 17 receptor...    31   3.6  

>BC013427-1|AAH13427.2|  253|Homo sapiens PUS3 protein protein.
          Length = 253

 Score = 85.0 bits (201), Expect = 3e-16
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 487 KPQYSMASDLPLNLFKCAYEIEDTNRWVYEREALITLISDLRTEWTMHAVKTTMIQDYIR 308
           KPQYSMA + PL L+ C +E     +W+Y++EA    I+ L+  W  HAVKT M+   ++
Sbjct: 83  KPQYSMAVEFPLVLYDCKFE---NVKWIYDQEAQEFNITHLQQLWANHAVKTHMLYSMLQ 139

Query: 307 ELEKVPLASETEDRANDECE----QDEIASYAACLLQGVKPKNYTPLMKRPTCSTLHEKI 140
            L+ VP+      + +   E    +  +    +  ++GVK + Y PLM RP C  L  +I
Sbjct: 140 GLDTVPVPCGIGPKMDGMTEWGNVKPSVIKQTSAFVEGVKMRTYKPLMDRPKCQGLESRI 199

Query: 139 AHYKKRRKI 113
            H+ +R +I
Sbjct: 200 QHFVRRGRI 208



 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -1

Query: 722 DVRNGLLEFIRRIMXXXXXXXXXXXXD----KPTSMYYLLIEGNAFLWHQIRCIMGVLLL 555
           DV NG++ F R I+            +    +P  +    + G AFL+HQ+RC+M +L L
Sbjct: 1   DVANGVINFQRTILSAQVQLVGQSPGEGRWQEPFQLCQFEVTGQAFLYHQVRCMMAILFL 60

Query: 554 IGEEKERPDVVLELLDVEKXSGK 486
           IG+  E+P+++ ELL++EK   K
Sbjct: 61  IGQGMEKPEIIDELLNIEKNPQK 83


>BC004822-1|AAH04822.1|  481|Homo sapiens pseudouridylate synthase 3
           protein.
          Length = 481

 Score = 85.0 bits (201), Expect = 3e-16
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 487 KPQYSMASDLPLNLFKCAYEIEDTNRWVYEREALITLISDLRTEWTMHAVKTTMIQDYIR 308
           KPQYSMA + PL L+ C +E     +W+Y++EA    I+ L+  W  HAVKT M+   ++
Sbjct: 311 KPQYSMAVEFPLVLYDCKFE---NVKWIYDQEAQEFNITHLQQLWANHAVKTHMLYSMLQ 367

Query: 307 ELEKVPLASETEDRANDECE----QDEIASYAACLLQGVKPKNYTPLMKRPTCSTLHEKI 140
            L+ VP+      + +   E    +  +    +  ++GVK + Y PLM RP C  L  +I
Sbjct: 368 GLDTVPVPCGIGPKMDGMTEWGNVKPSVIKQTSAFVEGVKMRTYKPLMDRPKCQGLESRI 427

Query: 139 AHYKKRRKI 113
            H+ +R +I
Sbjct: 428 QHFVRRGRI 436



 Score = 77.8 bits (183), Expect = 4e-14
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
 Frame = -1

Query: 758 IGSHXFRHFCKMDVRNGLLEFIRRIMXXXXXXXXXXXXD----KPTSMYYLLIEGNAFLW 591
           +G+H FR+ CKMDV NG++ F R I+            +    +P  +    + G AFL+
Sbjct: 217 VGTHDFRNLCKMDVANGVINFQRTILSAQVQLVGQSPGEGRWQEPFQLCQFEVTGQAFLY 276

Query: 590 HQIRCIMGVLLLIGEEKERPDVVLELLDVEKXSGK 486
           HQ+RC+M +L LIG+  E+P+++ ELL++EK   K
Sbjct: 277 HQVRCMMAILFLIGQGMEKPEIIDELLNIEKNPQK 311


>AK055702-1|BAB70990.1|  481|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31140 fis, clone IMR322001218, highly similar to
           Mus musculus pseudouridine synthase 3 (Pus3) mRNA. ).
          Length = 481

 Score = 85.0 bits (201), Expect = 3e-16
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 487 KPQYSMASDLPLNLFKCAYEIEDTNRWVYEREALITLISDLRTEWTMHAVKTTMIQDYIR 308
           KPQYSMA + PL L+ C +E     +W+Y++EA    I+ L+  W  HAVKT M+   ++
Sbjct: 311 KPQYSMAVEFPLVLYDCKFE---NVKWIYDQEAQEFNITHLQQLWANHAVKTHMLYSMLQ 367

Query: 307 ELEKVPLASETEDRANDECE----QDEIASYAACLLQGVKPKNYTPLMKRPTCSTLHEKI 140
            L+ VP+      + +   E    +  +    +  ++GVK + Y PLM RP C  L  +I
Sbjct: 368 GLDTVPVPCGIGPKMDGMTEWGNVKPSVIKQTSAFVEGVKMRTYKPLMDRPKCQGLESRI 427

Query: 139 AHYKKRRKI 113
            H+ +R +I
Sbjct: 428 QHFVRRGRI 436



 Score = 77.8 bits (183), Expect = 4e-14
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
 Frame = -1

Query: 758 IGSHXFRHFCKMDVRNGLLEFIRRIMXXXXXXXXXXXXD----KPTSMYYLLIEGNAFLW 591
           +G+H FR+ CKMDV NG++ F R I+            +    +P  +    + G AFL+
Sbjct: 217 VGTHDFRNLCKMDVANGVINFQRTILSAQVQLVGQSPGEGRWQEPFQLCQFEVTGQAFLY 276

Query: 590 HQIRCIMGVLLLIGEEKERPDVVLELLDVEKXSGK 486
           HQ+RC+M +L LIG+  E+P+++ ELL++EK   K
Sbjct: 277 HQVRCMMAILFLIGQGMEKPEIIDELLNIEKNPQK 311


>AF494208-1|AAM74077.1|  739|Homo sapiens interleukin 17
           receptor-like protein long form protein.
          Length = 739

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 253 CEQDEIASYAACLLQGVKPKNYTPLMKRPTCSTLHEKIAHY 131
           CEQ++     +CLLQ V P +Y   +   T +T   K+ HY
Sbjct: 247 CEQEQTTEMTSCLLQNVSPGDYIIELVDDTNTT--RKVMHY 285


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,489,927
Number of Sequences: 237096
Number of extensions: 1780290
Number of successful extensions: 7599
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7591
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)