Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_F15
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0246 - 16807619-16808145,16808208-16808868 39 0.004
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764... 33 0.20
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260... 33 0.26
02_05_1127 + 34292894-34293284,34293948-34295443 31 1.1
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 31 1.4
02_02_0171 - 7427862-7428293 31 1.4
04_03_0229 - 13006869-13007017,13007925-13008089,13008178-130083... 30 1.9
10_01_0026 - 351737-353443 30 2.5
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 29 3.3
03_05_0267 - 22538631-22539452 29 3.3
01_01_0244 - 2005152-2005649,2006186-2006254 29 3.3
11_03_0197 - 11499012-11499318,11499353-11499489 29 4.3
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 29 4.3
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 29 4.3
01_06_0699 - 31313967-31315106 29 4.3
01_06_0415 + 29185332-29185443,29186043-29186432,29186794-291871... 29 4.3
12_01_0727 + 6446283-6449300 29 5.7
03_06_0698 + 35608666-35608709,35608810-35608958,35609493-356095... 29 5.7
03_02_0777 - 11116217-11116812,11117176-11117299 29 5.7
07_03_0491 - 18707721-18708179 28 7.5
03_02_0464 - 8683232-8684596 28 7.5
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278... 28 7.5
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 28 9.9
06_03_0136 + 17056256-17056420,17056864-17057036,17057272-170572... 28 9.9
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 28 9.9
03_06_0416 - 33780911-33781861 28 9.9
01_06_0202 + 27483503-27483543,27484567-27485311 28 9.9
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 622 CLCARSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPASR 747
C C R + S S A PC TP R+PR S +TPGPP+++
Sbjct: 118 CCCGRRRRAASPS--ASPCTTPPATARAPRTS-STPGPPSAQ 156
>01_06_1320 +
36272716-36273339,36274222-36275762,36276349-36276490,
36276622-36276729,36276814-36277026,36277113-36277223,
36278056-36278250,36278874-36279048,36279189-36279226
Length = 1048
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 58 GLNIPGSKPMGPEV--PGIPGRATALSELNSRFESSLKTLKGISAE 189
G+ PGS P+G V P PG LSE N RF S+L+ L G +++
Sbjct: 640 GMAYPGS-PLGSPVASPSGPGSPLRLSERNMRFPSNLRNLGGWNSD 684
>02_01_0362 +
2607097-2607371,2607766-2608612,2608842-2608910,
2609968-2610202,2610454-2610536,2610924-2611046,
2611326-2611379
Length = 561
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 625 LCARSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPASRXSDXST 765
L A S+ STS + PC +P + P+ +TP PPA + S+
Sbjct: 36 LHAPSRRSFSTSASSSPCTSPPAPPETSPPNTSTPAPPAPDVPENSS 82
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 598 TTVSESRRCLCARSKGGVSTSRRARPCRTPGVGGRSPRPS-AATPGPPASRXSDXSTRHS 774
TT + + C A S+ +SR P R PG PRP+ A P P + ++ +
Sbjct: 19 TTSTSTPTCSAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASPRASWAEAARLER 78
Query: 775 KAASRTS 795
+ R +
Sbjct: 79 RRRRRAT 85
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 634 RSKGGVSTSRRARPCRTPGV----GGRSPRPSAATPGPPAS 744
R KGG PCR V GGR P P+AA+P P A+
Sbjct: 324 RGKGG---ELEGDPCRGRAVVVLLGGRGPEPAAASPAPAAA 361
>02_02_0171 - 7427862-7428293
Length = 143
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 643 GGVSTSRRARPCRTPGVGGRSPRPS-AATP 729
GG RR R C TP GGR P PS +ATP
Sbjct: 38 GGSPRRRRRRSCTTP--GGRRPSPSTSATP 65
>04_03_0229 -
13006869-13007017,13007925-13008089,13008178-13008332,
13010276-13011021
Length = 404
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = -1
Query: 796 LMCDWRPSSAWSXCPXDGKPEDLASLLTAVESDPRPRACGTAWRACSSTRRPSSARRGTA 617
L C R A P + ED LL+ S P AW ++T +++RR +
Sbjct: 68 LSCQLRHGLAMRRVPFPRRGEDGVHLLSQTPSSP------AAWALSAATTGTAASRRSLS 121
Query: 616 STPRRW 599
T +RW
Sbjct: 122 CTGKRW 127
>10_01_0026 - 351737-353443
Length = 568
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 634 RSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPASRXSDXSTR 768
+S GGVS+S +A+P S S TP PA R S S+R
Sbjct: 49 KSAGGVSSSTQAQP------SSESSSESTTTPSAPAERKSGGSSR 87
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 637 SKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPASRXSDXSTR 768
++ +S+S+ A P +T + R+P P P PP R S S++
Sbjct: 673 ARSQISSSKSATPAQTRSIKTRAPNP--PPPPPPPRRPSQISSK 714
>03_05_0267 - 22538631-22539452
Length = 273
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 643 GGVSTSRRARPCRTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAAS 786
GG + RRA P P SP A+P P +R S S+ S+ S
Sbjct: 164 GGPTVRRRASPPARPRWWPCSPSSPPASPSPSPARTSPPSSSPSRGCS 211
>01_01_0244 - 2005152-2005649,2006186-2006254
Length = 188
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +1
Query: 673 PCRTPGV----GGRSPRPSAATPGPPAS 744
PCR V GGR P P+AA+P P A+
Sbjct: 88 PCRGRAVVVLLGGRGPEPAAASPAPAAA 115
>11_03_0197 - 11499012-11499318,11499353-11499489
Length = 147
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +1
Query: 661 RRARPCRTPGVGGRSPRPSAA---TPGPPASR 747
+R + CR P VGG SPR AA TP P R
Sbjct: 42 KRRQSCRIPVVGGWSPRMDAAESITPDCPRDR 73
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 598 TTVSESRRCLCARSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPAS 744
T+V E RR L R G++ P +P V SPR + TP PP+S
Sbjct: 96 TSVEERRRVLLRRL--GLAHDSEPLPHPSPRVSSSSPR--SPTPSPPSS 140
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +1
Query: 628 CARSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAAS 786
CA S S RAR TP RSPR TP P + S+ + R K +S
Sbjct: 289 CALPLEPASGSPRARVL-TPEPATRSPRARVQTPEPEPTASSERARRPRKRSS 340
>01_06_0699 - 31313967-31315106
Length = 379
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -1
Query: 790 CDWRPSSAWSX---CPXD-GKPEDLASLLTAVESDPRPRACGTAWRACSSTRRPSSARRG 623
C RP + W CP G PED+A A+ A +A S + S+A+RG
Sbjct: 126 CHCRPENFWPPSPRCPGCVGLPEDVAITERALRRRFAVLALASARECWSMGKEVSAAKRG 185
Query: 622 TASTPRRWCTEYG 584
R W TE G
Sbjct: 186 I----RSWATENG 194
>01_06_0415 +
29185332-29185443,29186043-29186432,29186794-29187131,
29187681-29187896
Length = 351
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 706 PRPSAATPGPPASRXSDXSTRHSKAASRTSMY 801
PRP A P PP R S + +SKA Y
Sbjct: 13 PRPRTAAPSPPRCRLSSSAYSYSKARHALRRY 44
>12_01_0727 + 6446283-6449300
Length = 1005
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 79 KPMGPEVPGIPGRATALSELNSRFESSL 162
+PM VP +PG+A+AL +L F++++
Sbjct: 22 QPMAAPVPCLPGQASALLQLKRSFDATV 49
>03_06_0698 +
35608666-35608709,35608810-35608958,35609493-35609531,
35610024-35610163,35611130-35611244,35611281-35611399,
35611413-35611979
Length = 390
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 538 SHRRRASFDKLLFILFHILCTTVSESRRCLCARSKGGVSTSRRA 669
+HR+ K+L + LC+T+ E + A GG S RRA
Sbjct: 133 NHRKMEDEQKILCLAKSSLCSTMDEQQLAQYATLAGGGSVRRRA 176
>03_02_0777 - 11116217-11116812,11117176-11117299
Length = 239
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +1
Query: 640 KGGVSTSRRARPCRTPGV--GGRSPRPSAAT-PGP 735
+GG S R A P GGRSPR AAT PGP
Sbjct: 41 RGGRSPGREAATLPGPDCYQGGRSPRREAATSPGP 75
>07_03_0491 - 18707721-18708179
Length = 152
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 637 SKGGVSTSRRARPCRTPGVGGRS--PRPSAATPGPPASRXSDXSTRH 771
S+ G + +R +RP VGGRS P P A G A +RH
Sbjct: 68 SRPGTAAARSSRPRPGSAVGGRSTAPEPGAGGDGGGAVSGEGGVSRH 114
>03_02_0464 - 8683232-8684596
Length = 454
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 604 VSESRRCLCAR-SKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPAS 744
+++S CL R + V S + PC +P + SP+ + TP P+S
Sbjct: 136 LAQSSSCLPQRQASSSVVLSTPSSPCASPFLSPLSPQSLSITPAVPSS 183
>02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,
2785402-2785486,2785517-2787578,2787732-2787753,
2788157-2788327,2791473-2791517,2792558-2793874,
2793962-2794012,2794090-2794188,2794352-2794504,
2794554-2794571
Length = 1789
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -3
Query: 308 GPMTSTSLLDNKMDITDENVLPVPLSSIKEEDVKVDVTTVSAEIPLRVFNDDSKRE 141
GP +T L K ++D P L + + S+++PLR F D+ +R+
Sbjct: 1289 GPGITTRLNPMKTRLSDNQERPRYLRDSFRSSTSMAIHGSSSKVPLRKFGDEKRRQ 1344
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/65 (24%), Positives = 23/65 (35%)
Frame = +1
Query: 592 LCTTVSESRRCLCARSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPASRXSDXSTRH 771
+ S S + S + S R P +P P PS A+ PP + + R
Sbjct: 1 MAAAASSSLLAAASSSSRAAAVSARRAPSASPAAAASLPSPSRASCAPPLRASAARTLRS 60
Query: 772 SKAAS 786
AS
Sbjct: 61 RVVAS 65
>06_03_0136 +
17056256-17056420,17056864-17057036,17057272-17057297,
17057524-17057922,17058190-17058265,17058432-17058507,
17058930-17059013,17059446-17059570,17060146-17060389,
17060968-17061031,17061218-17061726
Length = 646
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = -3
Query: 377 QSNLELKPVIKQEIDDVKYDSTIGPMTSTSLLDNKMDITDENVL---PVPLSSIKEEDVK 207
++NL+ P E++ + + GP+ +T D +D+ ++ + P + S K DV
Sbjct: 145 ETNLQTIPPNLNEVNPLASEGESGPVDNTKASDGIIDLEGQDQVDGEPTTMDSTKVPDVI 204
Query: 206 VDV 198
+D+
Sbjct: 205 IDL 207
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 631 ARSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPAS 744
A +KG T + A+ R P V PRPSA P S
Sbjct: 19 AEAKGTPPTPKSAKIARKPAVPKAPPRPSADKSQSPGS 56
>03_06_0416 - 33780911-33781861
Length = 316
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 664 RARPCRTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAASR 789
RA P R+P GG R + A P P + + ++ H+ R
Sbjct: 12 RATPPRSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGRGR 53
>01_06_0202 + 27483503-27483543,27484567-27485311
Length = 261
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 631 ARSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPPAS 744
AR GGV RRA P R P P S G P S
Sbjct: 13 ARPVGGVRRERRAAPRRRPTAAAARPSSSHGRWGKPWS 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,354,814
Number of Sequences: 37544
Number of extensions: 438546
Number of successful extensions: 2249
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -