Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_F15
(802 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 89 2e-17
AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 89 2e-17
AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 89 2e-17
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein. 33 1.6
L13698-1|AAA72368.1| 345|Homo sapiens protein ( Human gas1 gene... 32 2.8
BC132682-1|AAI32683.1| 345|Homo sapiens GAS1 protein protein. 32 2.8
BC074908-1|AAH74908.1| 345|Homo sapiens growth arrest-specific ... 32 2.8
BC074809-1|AAH74809.1| 345|Homo sapiens growth arrest-specific ... 32 2.8
AL158149-1|CAH71308.1| 345|Homo sapiens growth arrest-specific ... 32 2.8
BC093736-1|AAH93736.1| 367|Homo sapiens heparan sulfate D-gluco... 31 4.8
BC093734-1|AAH93734.1| 367|Homo sapiens heparan sulfate (glucos... 31 4.8
AY359095-1|AAQ89453.1| 367|Homo sapiens HS3ST2 protein. 31 4.8
AF105375-1|AAD30207.1| 367|Homo sapiens heparan sulfate D-gluco... 31 4.8
AF105374-1|AAD30206.1| 367|Homo sapiens heparan sulfate D-gluco... 31 4.8
AB209794-1|BAD93031.1| 345|Homo sapiens heparan sulfate D-gluco... 31 4.8
BC032099-1|AAH32099.1| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.4
BC006132-1|AAH06132.2| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.4
AL451085-7|CAI13244.1| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.4
AL451085-6|CAI13243.1| 369|Homo sapiens pygopus homolog 2 (Dros... 31 6.4
AK092389-1|BAC03877.1| 406|Homo sapiens protein ( Homo sapiens ... 31 6.4
AF457208-1|AAL91371.1| 406|Homo sapiens pygopus 2 protein. 31 6.4
Z99754-2|CAI95600.2| 862|Homo sapiens axin 1 protein. 30 8.5
Z69667-6|CAI95589.2| 862|Homo sapiens axin 1 protein. 30 8.5
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 8.5
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 8.5
BC017447-1|AAH17447.1| 392|Homo sapiens Unknown (protein for IM... 30 8.5
AY534244-1|AAT07093.1| 641|Homo sapiens XK-related protein 6 pr... 30 8.5
AJ301560-1|CAC82736.1| 287|Homo sapiens hypothetical protein pr... 30 8.5
AF193039-1|AAG22467.1| 172|Homo sapiens unknown protein. 30 8.5
AF009674-1|AAC51624.1| 900|Homo sapiens axin protein. 30 8.5
AE006463-4|AAK61224.1| 862|Homo sapiens Axin protein. 30 8.5
AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein. 30 8.5
>AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor
TAFII150 protein.
Length = 1199
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/120 (35%), Positives = 66/120 (55%)
Frame = -3
Query: 800 YIDVRLAAFECLVXLSEXREAGGPGVAADGRGERPPTPGVRHGLARLLVDTPPFERAQRH 621
++D+R+AA E +V ++ + + P P VRH + +L PPF +
Sbjct: 883 FVDIRIAALEAVVDYTKVDRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMES 942
Query: 620 RLDSETVVHRIWNNINSNLSNDARLRCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 441
L +E +V ++W +NS S+D RLRC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 943 PLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 1002
>AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein
associated factor protein.
Length = 1189
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/120 (35%), Positives = 66/120 (55%)
Frame = -3
Query: 800 YIDVRLAAFECLVXLSEXREAGGPGVAADGRGERPPTPGVRHGLARLLVDTPPFERAQRH 621
++D+R+AA E +V ++ + + P P VRH + +L PPF +
Sbjct: 873 FVDIRIAALEAVVDYTKVDRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMES 932
Query: 620 RLDSETVVHRIWNNINSNLSNDARLRCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 441
L +E +V ++W +NS S+D RLRC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 933 PLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 992
>AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator
function protein.
Length = 1199
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/120 (35%), Positives = 66/120 (55%)
Frame = -3
Query: 800 YIDVRLAAFECLVXLSEXREAGGPGVAADGRGERPPTPGVRHGLARLLVDTPPFERAQRH 621
++D+R+AA E +V ++ + + P P VRH + +L PPF +
Sbjct: 883 FVDIRIAALEAVVDYTKVDRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMES 942
Query: 620 RLDSETVVHRIWNNINSNLSNDARLRCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 441
L +E +V ++W +NS S+D RLRC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 943 PLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 1002
>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
Length = 1312
Score = 32.7 bits (71), Expect = 1.6
Identities = 25/54 (46%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +1
Query: 607 SESRRCLCARSKGGVSTSRRARPCRTPGVGGR-SPRPSAAT----PGPPASRXS 753
+ESRR AR G S R AR G G P PSAA PGPP SR S
Sbjct: 15 TESRRFAAARWPGWRSLQRPARRSGRGGGGAAPGPYPSAAPPPPGPGPPPSRQS 68
>L13698-1|AAA72368.1| 345|Homo sapiens protein ( Human gas1 gene,
complete cds. ).
Length = 345
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 622 CLCARSKGGVSTSRRARPC--RTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAASRTS 795
C CA+ + ST R PC RT G G P A R D +R + A SR
Sbjct: 128 CDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCNLALSRYL 187
Query: 796 MY 801
Y
Sbjct: 188 TY 189
>BC132682-1|AAI32683.1| 345|Homo sapiens GAS1 protein protein.
Length = 345
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 622 CLCARSKGGVSTSRRARPC--RTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAASRTS 795
C CA+ + ST R PC RT G G P A R D +R + A SR
Sbjct: 128 CDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCNLALSRYL 187
Query: 796 MY 801
Y
Sbjct: 188 TY 189
>BC074908-1|AAH74908.1| 345|Homo sapiens growth arrest-specific 1
protein.
Length = 345
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 622 CLCARSKGGVSTSRRARPC--RTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAASRTS 795
C CA+ + ST R PC RT G G P A R D +R + A SR
Sbjct: 128 CDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCNLALSRYL 187
Query: 796 MY 801
Y
Sbjct: 188 TY 189
>BC074809-1|AAH74809.1| 345|Homo sapiens growth arrest-specific 1
protein.
Length = 345
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 622 CLCARSKGGVSTSRRARPC--RTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAASRTS 795
C CA+ + ST R PC RT G G P A R D +R + A SR
Sbjct: 128 CDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCNLALSRYL 187
Query: 796 MY 801
Y
Sbjct: 188 TY 189
>AL158149-1|CAH71308.1| 345|Homo sapiens growth arrest-specific 1
protein.
Length = 345
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 622 CLCARSKGGVSTSRRARPC--RTPGVGGRSPRPSAATPGPPASRXSDXSTRHSKAASRTS 795
C CA+ + ST R PC RT G G P A R D +R + A SR
Sbjct: 128 CDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCNLALSRYL 187
Query: 796 MY 801
Y
Sbjct: 188 TY 189
>BC093736-1|AAH93736.1| 367|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase 2 protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 619 RCLCARSKGGVSTSRRARPCRTPGVGGRSP-RPSAATPGPPASRXS 753
RCL S GG +++RPC G P PSA PA R S
Sbjct: 54 RCLRGPSAGGQKLLQKSRPCDPSGPTPSEPSAPSAPAAAVPAPRLS 99
>BC093734-1|AAH93734.1| 367|Homo sapiens heparan sulfate
(glucosamine) 3-O-sulfotransferase 2 protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 619 RCLCARSKGGVSTSRRARPCRTPGVGGRSP-RPSAATPGPPASRXS 753
RCL S GG +++RPC G P PSA PA R S
Sbjct: 54 RCLRGPSAGGQKLLQKSRPCDPSGPTPSEPSAPSAPAAAVPAPRLS 99
>AY359095-1|AAQ89453.1| 367|Homo sapiens HS3ST2 protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 619 RCLCARSKGGVSTSRRARPCRTPGVGGRSP-RPSAATPGPPASRXS 753
RCL S GG +++RPC G P PSA PA R S
Sbjct: 54 RCLRGPSAGGQKLLQKSRPCDPSGPTPSEPSAPSAPAAAVPAPRLS 99
>AF105375-1|AAD30207.1| 367|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase-2 protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 619 RCLCARSKGGVSTSRRARPCRTPGVGGRSP-RPSAATPGPPASRXS 753
RCL S GG +++RPC G P PSA PA R S
Sbjct: 54 RCLRGPSAGGQKLLQKSRPCDPSGPTPSEPSAPSAPAAAVPAPRLS 99
>AF105374-1|AAD30206.1| 367|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase-2 protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 619 RCLCARSKGGVSTSRRARPCRTPGVGGRSP-RPSAATPGPPASRXS 753
RCL S GG +++RPC G P PSA PA R S
Sbjct: 54 RCLRGPSAGGQKLLQKSRPCDPSGPTPSEPSAPSAPAAAVPAPRLS 99
>AB209794-1|BAD93031.1| 345|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase 2 variant protein.
Length = 345
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 619 RCLCARSKGGVSTSRRARPCRTPGVGGRSP-RPSAATPGPPASRXS 753
RCL S GG +++RPC G P PSA PA R S
Sbjct: 62 RCLRGPSAGGQKLLQKSRPCDPSGPTPSEPSAPSAPAAAVPAPRLS 107
>BC032099-1|AAH32099.1| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>BC006132-1|AAH06132.2| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AL451085-7|CAI13244.1| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AL451085-6|CAI13243.1| 369|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 369
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 126 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 172
>AK092389-1|BAC03877.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ35070 fis, clone PLACE5000139. ).
Length = 406
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AF457208-1|AAL91371.1| 406|Homo sapiens pygopus 2 protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>Z99754-2|CAI95600.2| 862|Homo sapiens axin 1 protein.
Length = 862
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 597 AQNMEQYKQ*FVERRSSPVRP-CGPVLHVVRR*TSYLLSATRNTSDDK 457
A + ++Y Q + R + VRP C PVLHVV + LS T S K
Sbjct: 724 APSKQRYVQEVMRRGRACVRPACAPVLHVVPAVSDMELSETETRSQRK 771
>Z69667-6|CAI95589.2| 862|Homo sapiens axin 1 protein.
Length = 862
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 597 AQNMEQYKQ*FVERRSSPVRP-CGPVLHVVRR*TSYLLSATRNTSDDK 457
A + ++Y Q + R + VRP C PVLHVV + LS T S K
Sbjct: 724 APSKQRYVQEVMRRGRACVRPACAPVLHVVPAVSDMELSETETRSQRK 771
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 122 VALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
+ LPG+PG G +GF PG P + E+G P
Sbjct: 2359 LGLPGLPGAPGVVGF-PGQTGP-RGEMGQP 2386
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 122 VALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
+ LPG+PG G +GF PG P + E+G P
Sbjct: 2391 LGLPGLPGAPGVVGF-PGQTGP-RGEMGQP 2418
>BC017447-1|AAH17447.1| 392|Homo sapiens Unknown (protein for
IMAGE:3506533) protein.
Length = 392
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 597 AQNMEQYKQ*FVERRSSPVRP-CGPVLHVVRR*TSYLLSATRNTSDDK 457
A + ++Y Q + R + VRP C PVLHVV + LS T S K
Sbjct: 254 APSKQRYVQEVMRRGRACVRPACAPVLHVVPAVSDMELSETETRSQRK 301
>AY534244-1|AAT07093.1| 641|Homo sapiens XK-related protein 6
protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 634 RSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPP 738
RS + +P PG G + P PSAA P PP
Sbjct: 84 RSAAADGGDQPLQPPAAPGAGRQPPTPSAARPEPP 118
>AJ301560-1|CAC82736.1| 287|Homo sapiens hypothetical protein
protein.
Length = 287
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 634 RSKGGVSTSRRARPCRTPGVGGRSPRPSAATPGPP 738
RS + +P PG G + P PSAA P PP
Sbjct: 84 RSAAADGGDQPLQPPAAPGAGRQPPTPSAARPEPP 118
>AF193039-1|AAG22467.1| 172|Homo sapiens unknown protein.
Length = 172
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 746 REAGGPGVAADGRGERPPTPGVRHGLA 666
R GPG A G GE G RHGLA
Sbjct: 70 RAGAGPGAAHHGSGEHAVRAGGRHGLA 96
>AF009674-1|AAC51624.1| 900|Homo sapiens axin protein.
Length = 900
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 597 AQNMEQYKQ*FVERRSSPVRP-CGPVLHVVRR*TSYLLSATRNTSDDK 457
A + ++Y Q + R + VRP C PVLHVV + LS T S K
Sbjct: 762 APSKQRYVQEVMRRGRACVRPACAPVLHVVPAVSDMELSETETRSQRK 809
>AE006463-4|AAK61224.1| 862|Homo sapiens Axin protein.
Length = 862
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 597 AQNMEQYKQ*FVERRSSPVRP-CGPVLHVVRR*TSYLLSATRNTSDDK 457
A + ++Y Q + R + VRP C PVLHVV + LS T S K
Sbjct: 724 APSKQRYVQEVMRRGRACVRPACAPVLHVVPAVSDMELSETETRSQRK 771
>AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein.
Length = 962
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 661 RRARPCRTPGVGGRSPRPSAATPGPPAS 744
RR R C TPG G P P + PP S
Sbjct: 5 RRPRACPTPGPGPSPPPPGSHVTAPPPS 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,681,085
Number of Sequences: 237096
Number of extensions: 2325018
Number of successful extensions: 14159
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 9869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14034
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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