Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_F15
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 43 3e-04
Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical pr... 29 5.1
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 29 5.1
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 29 5.1
U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical p... 28 6.8
Z67736-1|CAA91534.1| 237|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 28 8.9
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 28 8.9
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -3
Query: 689 PGVRHGLARLLVDTPPFERAQRHRLDSETVVHRIWNNINSNLSNDARLRCDLVDLYYTLY 510
P +R + RLL TPP + ++ R+W + +N S D+ +R +D+YY+LY
Sbjct: 966 PSIRRMIPRLLAQTPPTIFGSENAANTAETAERLW-KLCTNSSIDSCIRSGFLDVYYSLY 1024
Query: 509 GAKRPICCPLPE 474
P PE
Sbjct: 1025 ALGAPPALGGPE 1036
>Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical
protein K10C3.2 protein.
Length = 174
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 673 PCRTPGVGGRSPRPSAATPGPPASRXSDXSTRHS 774
P P V RSP P+A TP P AS S + R S
Sbjct: 88 PAAPPVVAQRSPAPAATTPSPSASPISQQTNRPS 121
>Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical
protein R01H10.6 protein.
Length = 361
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 353 VIKQEIDDVKYDSTIGPMTSTSLLDNKMDITDENVLPV 240
+I DDV+ D I P S D + TDE LPV
Sbjct: 296 IIDNNEDDVEIDDKIRPDAFASYFDGEHTATDEKQLPV 333
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 745 GKPEDLASLLTAVESDPRPRACGTAWRACSSTRRPSSARRGTASTPRR 602
G P A AV S PRP A W A + +S+RR RR
Sbjct: 445 GMPLFSAGFPPAVSSVPRPSAISDEWNAFLQNKDRNSSRRDHKDRTRR 492
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 698 PPTPGVRHGLARLLVDTPPFERAQRHRLDSETVVHRIWNNINSNLSND 555
PP P +R + +V PP ER R D+ET +RI + N N+
Sbjct: 259 PPPPVIRQPPPQRVVVAPPPERDWRK--DAETAANRICRVLKVNQENE 304
>Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical
protein ZC84.3 protein.
Length = 826
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 559 FDKLLFILFHILCTTVSESRRCLCARSKGGVSTSRRAR 672
+ KLL LF IL + SE+ + +C R G + T++ A+
Sbjct: 636 YAKLLLNLFEILSKSRSENNKKMCLRILGKMCTAQAAK 673
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 134 SDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
SD PG PG +GPIG PG P+ D+ P
Sbjct: 199 SDGMPGKPGDPGLAGPIG-PPGESGPIGDKGRTP 231
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 134 SDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
SD PG PG +GPIG PG P+ D+ P
Sbjct: 199 SDGMPGKPGDPGLAGPIG-PPGESGPIGDKGRTP 231
>U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical
protein F52E1.13b protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +1
Query: 538 SHRRRASFDKLLFILFHILCTTVSESRRCLCARSKGGVSTSRRARPCRTPGVGGRSPRPS 717
S RR S ++ + + T S+ SK G TSR++ GVG R P
Sbjct: 85 SSLRRQSSEEAEKSILETVRQTGSDGEEEASGMSKKGSITSRKSSGSHDSGVGTRPNSPI 144
Query: 718 AATPGPPASRXSD 756
A+ P+S +D
Sbjct: 145 ASNLHMPSSSNND 157
>Z67736-1|CAA91534.1| 237|Caenorhabditis elegans Hypothetical
protein F57G12.1 protein.
Length = 237
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 350 IKQEID-DVKYDSTIGPMTSTSLLDNKMD-ITDENVLPVPLSSIKEED 213
+K+E+ DV G S S++ +D + E +PVPLS+IK +
Sbjct: 35 VKKEVQQDVLMSGPTGYHKSWSVIQRAVDCLMTETTVPVPLSTIKNRE 82
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 31 LGAPSSSFRGLNIPGSKPMGPEVPGIPGRATALSELNSRF 150
+G P +SF G+ G P PG+PG ++ SR+
Sbjct: 1718 MGQPMNSFGGMPGMGLGPNAQNGPGLPGMNPQMNANQSRY 1757
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 31 LGAPSSSFRGLNIPGSKPMGPEVPGIPGRATALSELNSRF 150
+G P +SF G+ G P PG+PG ++ SR+
Sbjct: 1707 MGQPMNSFGGMPGMGLGPNAQNGPGLPGMNPQMNANQSRY 1746
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 230 SIKEEDVKVDVTTV-SAEIPLRVFN-DDSKREFSSDNAVALPGIPGTSGPIGFEPGM 66
+IK E+ DV +AEIPL N + S E ++NA P PG S P +P M
Sbjct: 637 AIKVEEEPTDVVEPEAAEIPLETGNLEASSVEQDAENAEN-PEDPGDSDPPNLDPEM 692
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 230 SIKEEDVKVDVTTV-SAEIPLRVFN-DDSKREFSSDNAVALPGIPGTSGPIGFEPGM 66
+IK E+ DV +AEIPL N + S E ++NA P PG S P +P M
Sbjct: 637 AIKVEEEPTDVVEPEAAEIPLETGNLEASSVEQDAENAEN-PEDPGDSDPPNLDPEM 692
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,605,803
Number of Sequences: 27780
Number of extensions: 353407
Number of successful extensions: 2125
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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