Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_F13
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 57 2e-08
03_01_0034 + 318432-318825,318902-319851 57 2e-08
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 57 2e-08
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 57 2e-08
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 56 4e-08
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 56 4e-08
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 56 4e-08
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 53 2e-07
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 35 0.063
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 35 0.063
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 35 0.063
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 35 0.063
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY G GMDEMEFTEAESNM LVSEY
Sbjct: 570 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 602
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY G GMDEMEFTEAESNM LVSEY
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY G GMDEMEFTEAESNM LVSEY
Sbjct: 411 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 443
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY G GMDEMEFTEAESNM LVSEY
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY G GMDEMEFTEAESNM LV+EY
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY G GMDEMEFTEAESNM LV+EY
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY G GMDEMEFTEAESNM LV+EY
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -1
Query: 707 RXKAXLXWYXGXGMDEMEFTEAESNMXXLVSEY 609
R KA L WY GMDEMEFTEAESNM LV+EY
Sbjct: 406 RRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEY 438
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 35.1 bits (77), Expect = 0.063
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 701 KAXLXWYXGXGMDEMEFTEAESNMXXLVSEYPXV 600
+A + WY G GM+E EF+EA ++ L +Y V
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 35.1 bits (77), Expect = 0.063
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 701 KAXLXWYXGXGMDEMEFTEAESNMXXLVSEYPXV 600
+A + WY G GM+E EF+EA ++ L +Y V
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 35.1 bits (77), Expect = 0.063
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 701 KAXLXWYXGXGMDEMEFTEAESNMXXLVSEYPXV 600
+A + WY G GM+E EF+EA ++ L +Y V
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 35.1 bits (77), Expect = 0.063
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 701 KAXLXWYXGXGMDEMEFTEAESNMXXLVSEYPXV 600
+A + WY G GM+E EF+EA ++ L +Y V
Sbjct: 483 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 516
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,858,387
Number of Sequences: 37544
Number of extensions: 241114
Number of successful extensions: 453
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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