Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_F07
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55856-4|AAK68354.1|  443|Caenorhabditis elegans Synaptotagmin p...    31   1.2  
AJ303370-1|CAC33881.1|  155|Caenorhabditis elegans synaptotagmin...    31   1.2  
U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81142-3|CAB03505.1|  491|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z81036-2|CAD30433.1|  431|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z81036-1|CAB02742.1|  473|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AF291851-1|AAK55968.1|  103|Caenorhabditis elegans G protein sig...    28   8.7  

>U55856-4|AAK68354.1|  443|Caenorhabditis elegans Synaptotagmin
           protein 1, isoform b protein.
          Length = 443

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -1

Query: 522 QNLSRILDFRILKEGFIXTHIFLEKFRLHIRSDKKNTSHRLIHPNFNSSIIFNKL 358
           +NL + +D   L + ++   +F E  R  ++  K N   + ++P FN S +F+KL
Sbjct: 317 KNLKK-MDVGGLSDPYVKLEMFGED-RKRLKKKKTNIKRKTLNPYFNESFVFDKL 369


>AJ303370-1|CAC33881.1|  155|Caenorhabditis elegans synaptotagmin 1
           protein.
          Length = 155

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -1

Query: 522 QNLSRILDFRILKEGFIXTHIFLEKFRLHIRSDKKNTSHRLIHPNFNSSIIFNKL 358
           +NL + +D   L + ++   +F E  R  ++  K N   + ++P FN S +F+KL
Sbjct: 36  KNLKK-MDVGGLSDPYVKLEMFGED-RKRLKKKKTNIKRKTLNPYFNESFVFDKL 88


>U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical
           protein T10E9.3 protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 462 IFLEKFRLHIRSDKKNTSHRLIHPNFNSSIIFNKLM*QIILKVTSH 325
           +FLE    H RS  +NT     + N++ S  +++L   I+ K+ SH
Sbjct: 9   LFLEVTTTHQRSITQNTDCSFHYSNYSVSWNYDELSNDIVFKLKSH 54


>Z81142-3|CAB03505.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK1037.6 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 593 LIDNFMVWIENTPEFEQFNRTQLNKTFQGF*ILG 492
           L      ++ +TP F QF+ T+ N TFQ    LG
Sbjct: 331 LFGELTTFVMSTPGFAQFSFTRKNSTFQSSSFLG 364


>Z81036-2|CAD30433.1|  431|Caenorhabditis elegans Hypothetical
           protein C16C2.2b protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 659 YRTLLKKLHF*VHTNTRXGEILLIDNFMVWIENTPEFEQF 540
           YR L+ +L F + T      +   D  + W++   EF+ F
Sbjct: 207 YRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPF 246


>Z81036-1|CAB02742.1|  473|Caenorhabditis elegans Hypothetical
           protein C16C2.2a protein.
          Length = 473

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 659 YRTLLKKLHF*VHTNTRXGEILLIDNFMVWIENTPEFEQF 540
           YR L+ +L F + T      +   D  + W++   EF+ F
Sbjct: 207 YRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPF 246


>AF291851-1|AAK55968.1|  103|Caenorhabditis elegans G protein
           signaling regulator EAT-16 protein.
          Length = 103

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 659 YRTLLKKLHF*VHTNTRXGEILLIDNFMVWIENTPEFEQF 540
           YR L+ +L F + T      +   D  + W++   EF+ F
Sbjct: 7   YRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPF 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,759,218
Number of Sequences: 27780
Number of extensions: 311666
Number of successful extensions: 613
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)