Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_F04
(794 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 101 2e-22
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 99 4e-22
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 73 4e-14
SPBC336.14c |ppk26||serine/threonine protein kinase Ppk26|Schizo... 30 0.33
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 30 0.44
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 30 0.44
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 29 1.0
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.0
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 2.3
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 27 3.1
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 4.1
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.4
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 5.4
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 9.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.4
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 9.4
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 25 9.4
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 101 bits (241), Expect = 2e-22
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = -2
Query: 484 ETEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 305
+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N
Sbjct: 524 KAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNT 583
Query: 304 LADKEEYEHKQKELEGIYNPIITKMYQ 224
A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 584 TAAKDEYEDKQKELEGVANPIMAKIYQ 610
Score = 31.9 bits (69), Expect = 0.11
Identities = 34/103 (33%), Positives = 41/103 (39%)
Frame = -1
Query: 791 EXQPGVXIXXIXGXSXX*PKDNXXLGKFELXKDPTRRXRGVXSN*GHLRX*XXAXGIXQX 612
+ QPGV I G KD LGKFEL P RGV + A GI
Sbjct: 431 DNQPGVLIQVFEGERAR-TKDCNLLGKFELSGIPPA-PRGVPQI--EVTFDVDANGILNV 486
Query: 611 SRISXLVLRXXQTXRSRSPLXXTVGLLXXXXIERMVNEAEKYR 483
S L + + G L I+RMV+EAEKY+
Sbjct: 487 S-----ALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYK 524
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 99 bits (238), Expect = 4e-22
Identities = 43/87 (49%), Positives = 64/87 (73%)
Frame = -2
Query: 484 ETEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 305
+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN
Sbjct: 524 KAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNT 583
Query: 304 LADKEEYEHKQKELEGIYNPIITKMYQ 224
A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 584 TAAKDEFEAKQKELESVANPIMAKIYQ 610
Score = 30.7 bits (66), Expect = 0.25
Identities = 34/103 (33%), Positives = 40/103 (38%)
Frame = -1
Query: 791 EXQPGVXIXXIXGXSXX*PKDNXXLGKFELXKDPTRRXRGVXSN*GHLRX*XXAXGIXQX 612
+ QPGV I G KD LGKFEL P RGV + A GI
Sbjct: 431 DNQPGVLIQVFEGERAR-TKDCNLLGKFELSGIPPA-PRGVPQI--EVTFDVDANGILNV 486
Query: 611 SRISXLVLRXXQTXRSRSPLXXTVGLLXXXXIERMVNEAEKYR 483
S L + + G L I+RMV EAEKY+
Sbjct: 487 S-----ALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYK 524
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 73.3 bits (172), Expect = 4e-14
Identities = 35/96 (36%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = -2
Query: 505 LMRQRSTETEDDK-QKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKCND 332
++++ E+DK KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD D
Sbjct: 546 MVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVED 605
Query: 331 TIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKMY 227
+WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 606 VAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 25.8 bits (54), Expect = 7.1
Identities = 25/83 (30%), Positives = 35/83 (42%)
Frame = -1
Query: 734 KDNXXLGKFELXKDPTRRXRGVXSN*GHLRX*XXAXGIXQXSRISXLVLRXXQTXRSRSP 555
KDN LGKF+L P RGV + A G+ S + + + +
Sbjct: 478 KDNNLLGKFDLRGIPPA-PRGVPQI--EVTFEVDANGVLTVSAVD----KSGKGKPEKLV 530
Query: 554 LXXTVGLLXXXXIERMVNEAEKY 486
+ G L IERMV EAE++
Sbjct: 531 IKNDKGRLSEEDIERMVKEAEEF 553
>SPBC336.14c |ppk26||serine/threonine protein kinase
Ppk26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 589
Score = 30.3 bits (65), Expect = 0.33
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -2
Query: 487 TETEDDKQKETIQAKNALESYCFSMKST-MEDEKLKEKISDSDKQTILDKCNDTIKWLDS 311
+E +DK E +N +ES+ M S +E EK++ KISD+ + I ++
Sbjct: 441 SEVPEDKNLELF-LQNHIESFFPIMSSPYVECEKMERKISDAFQHGRFFNILCKIMFIID 499
Query: 310 NQLADKEEYEHKQKELEGIY 251
N A +E ++KE+ IY
Sbjct: 500 NNRASREYPIAREKEISLIY 519
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 29.9 bits (64), Expect = 0.44
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = -2
Query: 553 YXXRXVFSXXEXSSVWLMRQRSTETEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 374
Y + S + + ++ R T + +++ + A AL + E+ I
Sbjct: 156 YLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVI 215
Query: 373 SDSDKQTILDKCNDTIKWLDSNQLADK 293
+K T+ D+ NDT +WLD +L DK
Sbjct: 216 GKDEKYTLYDQ-NDTKEWLD--KLGDK 239
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 29.9 bits (64), Expect = 0.44
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = -2
Query: 460 ETIQAKNALESYCFSMKSTMED--EKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKE 290
ET+ KNALE Y + ++ ++D + S + +L K D WL + + K
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKFKEMLTKAED---WLYEEGEDTTKA 631
Query: 289 EYEHKQKELEGIYNPI 242
Y K ++L + PI
Sbjct: 632 VYTAKLEDLMRVGGPI 647
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 28.7 bits (61), Expect = 1.0
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = -2
Query: 511 VWLMRQRSTETEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI--LDKC 338
+ L+ R E E +++ET + KN + ++ ++ + KEK + K+T ++
Sbjct: 206 IQLVVTREVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEEL 265
Query: 337 NDTIK-WLDSNQLADKEEYEHKQKEL 263
N T W + KEEY K L
Sbjct: 266 NKTKPIWTRNPSEVTKEEYASFYKSL 291
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 385 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 260
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 484 ETEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 323
E DDKQ + KN+LE+ M+ + E K D ++ LDK D K
Sbjct: 1278 EDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDLEK 1330
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 754 GGAXYDPKITXCSVNSSWXKIPPGAXVACXQIEV 653
GG +DPK+ +++ IPPGA + I +
Sbjct: 611 GGGYFDPKMMREAIHKLSLNIPPGAGICVNVIYI 644
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 478 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 317
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -2
Query: 478 EDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN-- 308
E K+ ET++ KN+ + + ++ E LK +K ++++ IK + N
Sbjct: 503 EVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVS 562
Query: 307 QLADK-EEYEHKQKELEGIYNPII 239
+L +EY +K K+ E YN ++
Sbjct: 563 ELNGTIDEYRNKLKDKEETYNEVM 586
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 216 EESPEVCRASRAEHPEPE 163
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 502 MRQRSTETEDDKQKETIQAKNALESYCFSMKST 404
M + + + K+TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQTILTKNAIQDYLVSLKIT 279
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 9.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -2
Query: 451 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 272
+A+ A + +E EK KEK D D++ DT+ D NQ+ +E E Q
Sbjct: 254 KAREARRRRSAQNSAKLEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQ 302
Query: 271 KELE 260
KE++
Sbjct: 303 KEVD 306
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 445 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 320
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = -2
Query: 502 MRQRSTETEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 374
+ + ++ + +K K+ K L YC KST + L+ +I
Sbjct: 876 VEETKSDVKSEKGKKQGTVKEDLPFYCIGFKSTAPEYTLRTRI 918
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/72 (18%), Positives = 35/72 (48%)
Frame = -2
Query: 481 TEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQL 302
T ++KQ + + N + K +E + ++++DK+ D + + D+N+
Sbjct: 53 TTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEE 112
Query: 301 ADKEEYEHKQKE 266
+++E + ++ E
Sbjct: 113 EEEDEEDDEEDE 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,342,036
Number of Sequences: 5004
Number of extensions: 40177
Number of successful extensions: 181
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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