Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_F02
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 219 2e-57
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 219 2e-57
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 219 2e-57
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 213 1e-55
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 210 7e-55
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 118 7e-27
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 1e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 88 9e-18
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 81 1e-15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 77 2e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 54 1e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.80
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.80
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.80
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 9.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 9.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 9.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 228 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 287
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 288 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 258 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 317
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 318 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 219 bits (536), Expect = 2e-57
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 213 bits (521), Expect = 1e-55
Identities = 100/105 (95%), Positives = 103/105 (98%)
Frame = -3
Query: 608 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 429
+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKII 330
Query: 428 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 210 bits (514), Expect = 7e-55
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = -3
Query: 602 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 423
GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAP
Sbjct: 273 GIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAP 332
Query: 422 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 118 bits (283), Expect = 7e-27
Identities = 52/103 (50%), Positives = 73/103 (70%)
Frame = -3
Query: 602 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 423
G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A
Sbjct: 272 GMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISAS 331
Query: 422 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 332 QERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 1e-23
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -3
Query: 563 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 393
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 392 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 297
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 87.8 bits (208), Expect = 9e-18
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 13/107 (12%)
Frame = -3
Query: 602 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------A 456
G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A
Sbjct: 277 GLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDA 336
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 321
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 337 FQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/101 (33%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = -3
Query: 635 LFNXRXW-YGACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 459
LF + W G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ +
Sbjct: 439 LFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTV 498
Query: 458 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 336
P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 499 VPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 16/112 (14%)
Frame = -3
Query: 599 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA------------ 456
I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+
Sbjct: 303 ISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSG 362
Query: 455 ----PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 312
P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 363 GRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = -3
Query: 605 CGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI-- 432
CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 287 CGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSN 346
Query: 431 -IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 288
+ P+ W G L L+ + WI+++++DE G S+ F T
Sbjct: 347 DVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = -3
Query: 605 CGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI-- 432
CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 287 CGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSN 346
Query: 431 -IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 288
+ P+ W G L L+ + WI+++++DE G S+ F T
Sbjct: 347 DVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 575 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 411
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 410 ----YSVWIGGSILASL-STFQQMWISKQEY 333
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 338 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 237
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 419 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 258
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,982,393
Number of Sequences: 27780
Number of extensions: 282415
Number of successful extensions: 820
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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