Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_F01
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    24   4.6  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    24   4.6  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   4.6  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.0  

>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 289 NIIISHLIKLYKHKMHCYHST 227
           N+ +++L KL  HK  C H+T
Sbjct: 227 NVCLTNLNKLACHKTRCEHAT 247


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 289 NIIISHLIKLYKHKMHCYHST 227
           N+ +++L KL  HK  C H+T
Sbjct: 227 NVCLTNLNKLACHKTRCEHAT 247


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 410 LIFRKQIDNYL-VQV*INLNFKPHIILNMYKNL 315
           +I  KQ   YL VQ+  +L++KPH+ L+  K L
Sbjct: 730 IIHSKQSIRYLGVQIHDHLSWKPHVELSTAKAL 762


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 182 VTLCAISFKHVESRNISYITKSNTT 108
           +T C I+ K+   +N+S+  KS+TT
Sbjct: 502 ITFCGITMKNYVEQNVSH--KSHTT 524


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,400
Number of Sequences: 2352
Number of extensions: 11549
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)