Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_E19
         (812 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   225   3e-59
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   218   5e-57
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    30   1.9  
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663...    29   3.3  

>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  225 bits (550), Expect = 3e-59
 Identities = 109/175 (62%), Positives = 126/175 (72%)
 Frame = -3

Query: 639 LGSXXGXGXXGVTXRWAHKEXTPVKHNXGXRKVACIGAWHPXXVSFTVARAGQKGYHHRT 460
           +G   G G  GV  RW      P K + G RKVACIGAWHP  VS+TVARAGQ GYHHRT
Sbjct: 221 IGVTKGKGYEGVVTRWGVTRL-PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRT 279

Query: 459 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCM 280
           EMNKK+Y+IG     K G+   + A TE+D +EK ITPMGGFPHYG V  D++MIKGCC+
Sbjct: 280 EMNKKVYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCV 333

Query: 279 GPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
           GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K  F G LK
Sbjct: 334 GPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388


>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  218 bits (532), Expect = 5e-57
 Identities = 105/167 (62%), Positives = 122/167 (73%)
 Frame = -3

Query: 639 LGSXXGXGXXGVTXRWAHKEXTPVKHNXGXRKVACIGAWHPXXVSFTVARAGQKGYHHRT 460
           +G   G G  GV  RW      P K + G RKVACIGAWHP  VS+TVARAGQ GYHHRT
Sbjct: 221 IGVTKGKGYEGVVTRWGVTRL-PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRT 279

Query: 459 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCM 280
           EMNKK+Y+IG     K G+   + A TE+D +EK ITPMGGFPHYG V  D++MIKGCC+
Sbjct: 280 EMNKKVYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCV 333

Query: 279 GPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 139
           GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K
Sbjct: 334 GPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 1   FFFFFFALSNVYFHGRHLRLRSSRWGCGSRSFFANTILLEC 123
           FFFFFF   +VY   RH R R  R     R  F ++    C
Sbjct: 102 FFFFFFFSGDVYCGHRHFRRRRRRRQWDGRLVFGSSGASAC 142


>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
            30366541-30366849,30367544-30370567,30370640-30372290,
            30372373-30373463,30373544-30373646,30373737-30374439,
            30374654-30375783,30375913-30376027,30376504-30376695,
            30377443-30377616,30378438-30378494,30378581-30378716,
            30378842-30378927,30379023-30379092,30379993-30380021,
            30380444-30380456,30380762-30381006
          Length = 3582

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 372  DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 277
            D +  + +P+GG P YG ++ D  +   C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,453,215
Number of Sequences: 37544
Number of extensions: 378052
Number of successful extensions: 840
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)