Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E17
(786 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 35 0.011
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 31 0.25
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 29 0.57
SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces pombe... 29 0.76
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.7
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 2.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 4.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 7.0
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 7.0
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.3
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 9.3
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 25 9.3
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = -3
Query: 574 TIGTVPLVG--MAGQPVPTAPVPDSPSQPAILPVTP-GQPAN 458
T ++P V MAGQP+ APVP +P+Q A+ P+ P PAN
Sbjct: 222 TYYSIPAVNHPMAGQPIAIAPVP-APNQAALPPIPPQALPAN 262
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDS 434
P+ VPDSP+ PA P T ++ S DS
Sbjct: 206 PITVTAVPDSPNPPAATPATVADNDDLSIVSSDS 239
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 29.5 bits (63), Expect = 0.57
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 270 SLRIILRMQLFNHPRFLNKSLGASSKQIISSRIVK 166
++ +L Q +N PR N S+ S KQIIS ++K
Sbjct: 124 TVTFLLTAQPYNGPRIPNASVHGSPKQIISGTLLK 158
>SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 337
Score = 29.1 bits (62), Expect = 0.76
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 367 TLTEPVYKESPYSVRTIQD--RGDSNHTMIRTPNFAPYYPTYAAIQ 236
T E +Y+ + +R ++ +G + ++ ++ P+YPT+AA+Q
Sbjct: 78 TTPEVIYEAAKKGIRGVKSYPKGATTNSESGVESYEPFYPTFAAMQ 123
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 428
P+ P P +P PA P P P +PA+S S P
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAP--PPPLPASSAPSVP 1744
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 544 AGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 428
AG P + +P PA +P+T G+ +P +S +AP
Sbjct: 1907 AGPPAGATAISGNPGMPAPVPLT-GKETAVPLSSMPNAP 1944
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 589 DKKYITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQP 464
DKK I ++P + A + + V S +I+P+ P +P
Sbjct: 965 DKKSSLIDSIPALSPAPSSLARSSVSSQRSSTSIIPIKPNKP 1006
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 428
P P+ P P S P I P P+++P + +AP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -3
Query: 529 PTAPVPDSPSQPAILPVTPGQP-ANIPATSGDSAP 428
P+AP P +P Q + P T P +IP S SAP
Sbjct: 125 PSAPAPPTP-QSELRPPTSAPPRPSIPPPSPASAP 158
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -3
Query: 535 PVPTAPVPDS----PSQPAILPVTPGQPANIPATSG 440
P T PVP S PS P +P + +IPA SG
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVPI 572
PG P A + +A + G A + + AVG+ + P S TVPI
Sbjct: 251 PGPISVPSAPYGRASSTIAEVSPMYGSHAAPYASTPSAAVGSSRGSTPASATVPI 305
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.0
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -2
Query: 413 TGTTAVSTSIPITISYAY*TSLQRISVFSTNHSGQGRQ*PHYDTHAKLRSVLSYVCSYST 234
+ TT++STSIP+T S A + S SG T S ++ + S
Sbjct: 886 SSTTSLSTSIPVTSSVAPAVTSTGSETSSVVGSGTDSATSSSWTAETSSSAITSSVAASV 945
Query: 233 TPASSIRAS 207
TP SS AS
Sbjct: 946 TPTSSSSAS 954
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGW 419
GMA P AP P P+ PA +P PG AT+ APG +
Sbjct: 528 GMALPPGMPAPFPGYPAVPA-MPGIPG------ATAPPGAPGSY 564
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 661 CSIIDLDYDLKVECVVSGMHLNMH 590
CS+ D DYD+ C+ H N H
Sbjct: 150 CSVCD-DYDICESCLTDNSHSNTH 172
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 298 NHTMIRTPNFAPYYPTYAAIQPPPLP 221
NHT+ +F PY ++A QPP LP
Sbjct: 299 NHTL---QSFHPYESLFSAGQPPSLP 321
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Frame = -3
Query: 574 TIGTVPLVGM----AGQPVP----TAPVPDSPSQPAILPVTPGQPANIPAT 446
T T+P + A QPV T+P+P +P + L VTP PA+
Sbjct: 577 TFDTLPTISQGLLAATQPVTSVLNTSPLPKTPEKDRSLNVTPSSSTPTPAS 627
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 571 IGTVPLVGMAGQPVPTAPVPDSPSQPA 491
+ + PL PVP +P+ SP++P+
Sbjct: 303 VSSYPLSRSVSTPVPMSPISISPAKPS 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,273,954
Number of Sequences: 5004
Number of extensions: 70234
Number of successful extensions: 251
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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