Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E17
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 38 0.011
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 36 0.025
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical pr... 36 0.033
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 35 0.076
Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical pr... 34 0.13
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 34 0.13
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 32 0.40
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 32 0.53
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 32 0.53
AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical... 32 0.53
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z75543-7|CAA99868.2| 139|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 31 0.93
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 31 0.93
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 31 0.93
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 31 0.93
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 31 0.93
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 31 0.93
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 31 0.93
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 31 0.93
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 31 0.93
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 31 0.93
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 31 0.93
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 31 0.93
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 31 0.93
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 31 0.93
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 30 1.6
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 30 1.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 30 1.6
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 30 1.6
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 30 1.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.2
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 30 2.2
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 30 2.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 2.2
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.9
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 2.9
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 2.9
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.8
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 29 3.8
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 3.8
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 3.8
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 29 5.0
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 29 5.0
AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical... 29 5.0
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 29 5.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 5.0
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 5.0
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 28 6.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 6.6
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 6.6
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 28 6.6
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 28 6.6
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 28 6.6
AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine re... 28 6.6
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 28 6.6
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 6.6
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 28 8.7
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 28 8.7
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 8.7
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 28 8.7
U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical pr... 28 8.7
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 28 8.7
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 28 8.7
AL132898-20|CAC14415.2| 243|Caenorhabditis elegans Hypothetical... 28 8.7
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 28 8.7
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 354 GSVSVGYSDWNGG*DGC-C-PGS-THPPGAESPEVAGILAGCPGVTGRMA--GWLGESGT 518
G+V GY GG GC C P S T PPG P L G PG G+ G G +G
Sbjct: 115 GAVGGGYGGGGGGGGGCQCSPSSNTCPPGPRGPPGQAGLDGLPGAPGQPGSNGGAGSNGA 174
Query: 519 --GAVGTGCPAIPTSGTVP 569
G+ G GC P P
Sbjct: 175 SEGSAG-GCKTCPAGPPGP 192
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/36 (55%), Positives = 21/36 (58%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 428
PVPTA P SP PAI P+ G PA PA SAP
Sbjct: 237 PVPTATKP-SPFAPAIAPLRDGAPAQPPAPIQASAP 271
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/36 (55%), Positives = 21/36 (58%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 428
PVPTA P SP PAI P+ G PA PA SAP
Sbjct: 237 PVPTATKP-SPFAPAIAPLRDGAPAQPPAPIQASAP 271
>Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical
protein M195.1 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.033
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGR--MAGWLGESGTGAVGTGCPAIPTSGTVP 569
PGS PG + P+ AG G G+ AG GE+G G GC P T P
Sbjct: 247 PGSAGQPGQDGPQGPAGDAGTDGAPGQAGAAGEQGEAGQPGEGGGCDHCPPPRTAP 302
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 34.7 bits (76), Expect = 0.076
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -3
Query: 565 TVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 428
T+ L A P P P+ PS+PA+ PV P P+ IP +S S P
Sbjct: 431 TITLSAPAKSPATYGPAPE-PSRPAVPPVAPA-PSVIPTSSQPSQP 474
Score = 32.7 bits (71), Expect = 0.31
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 10/115 (8%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVLXXXXXXXXXXXSLYPTLTE 356
P+P A P +PS P+I P P++ S SAP ++ P E
Sbjct: 1618 PIPPASSPSAPSIPSIPSTLPVAPSSSSVPSSPSAPS--ESTSTVSETPAPVNVNPASNE 1675
Query: 355 PVYKESPYSVRTIQDRGDSNH---------TMI-RTPNFAPYYPTYAAIQPPPLP 221
+E PY + + NH T+I ++ AP T A+QP P P
Sbjct: 1676 HEAEEGPYEPLSPPQPAEPNHVEEYQNTVDTIIEKSATPAPAPVTQPAVQPAPGP 1730
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 562 VPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPA-NIPATSGDSAP 428
+P QP T P +PS P I P P QP+ N TS S+P
Sbjct: 465 IPTSSQPSQPKQTQPAQPTPSAPKI-PEGPAQPSPNAVKTSYGSSP 509
>Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical
protein T12D8.4 protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 376 LYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNFAPYYPTY 248
LYPT+ P YKES + I + + +FAP YP Y
Sbjct: 384 LYPTMPSPYYKESFFGASDISE--EKEQAQFGEASFAPKYPFY 424
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 541 GQPVPTAPVPDSPSQPAIL-PVTPGQPANIPATSGDSAP 428
G P P P P+ PS P+IL P T G P+ P+ +G S P
Sbjct: 1418 GDPSP-GPSPNEPSNPSILGPSTGGDPSPGPSPNGPSNP 1455
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 TVPLVGMAGQPVPTAPVPDSPSQPAIL-PVTPGQPANIPATSGDSAP 428
+VP G P P P P+ PS P+IL P T G P+ P+ + S P
Sbjct: 1387 SVPESSTGGGPSP-GPSPNEPSNPSILGPSTGGDPSPGPSPNEPSNP 1432
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQP--AILPVTPGQPANIPATSGDSA 431
G AG P P A P +P P A P TPG P N A GD+A
Sbjct: 223 GGAGAPGP-AGAPGAPGGPGNAGTPGTPGAPGNAGAPGGDAA 263
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
P P P PD P+ P P PG P + APGG
Sbjct: 147 PPPCKPCPDGPAGP---PGPPGAPGDAGTNGAPGAPGG 181
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 GCCPGSTHPPGAES-PEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
GC PG PPG+E P +G+ G PG G AG + ES + + CPA P P
Sbjct: 97 GCPPGPPGPPGSEGHPGDSGV-PGNPGQPG-TAG-ISESHSSSGCITCPAGPMGSPGP 151
>AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical
protein Y17G7B.11 protein.
Length = 419
Score = 31.9 bits (69), Expect = 0.53
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Frame = -3
Query: 664 NCSIIDLDYDLKVECVVSGMHLNMHDKKY-ITIGTVPLVGM---AGQPVPTAPVPDSPSQ 497
NC II +DY L V+ + ++ + IGT+P+ M A +PT P +P
Sbjct: 280 NCPIIAVDYCLTVKVSTQQIFGGGLKCEFPLIIGTIPIRQMNQAAPGAMPTMPSVSAPPY 339
Query: 496 PAIL------PVTPGQPANIPATSGDSAP 428
P + V P P+ PA+ G AP
Sbjct: 340 PVVAGASASQAVYPTAPSAPPASPGGEAP 368
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPA----TSGDSAPG 425
PVP P P P P+TPG PA PA T G + PG
Sbjct: 263 PVPYPPGAYPPGMPG--PMTPGYPAQAPAAPRTTPGSAGPG 301
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPA----TSGDSAPG 425
PVP P P P P+TPG PA PA T G + PG
Sbjct: 261 PVPYPPGAYPPGMPG--PMTPGYPAQAPAAPRTTPGSAGPG 299
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +3
Query: 405 CPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSG 560
CP PPGA P+ A L G PGV G+ G G+S T IP G
Sbjct: 100 CPDG--PPGARGPQGAPGLPGAPGVDGK-PGVDGKSLTYVHAAEADCIPCPG 148
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 390 G*DGCCPGSTHPPGAESPEVAGILAGCPGVTGR--MAGWLGESGTGAVGTGCPAIPTSGT 563
G DG G+ PG + P+ AG G G+ AG G +G G GC P T
Sbjct: 244 GADGAA-GAPGQPGQDGPQGPAGDAGSDGAAGQPGAAGEQGPAGEPGAGGGCDHCPPPRT 302
Query: 564 VP 569
P
Sbjct: 303 AP 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -3
Query: 544 AGQPVPTA-PVPDSPSQPAILPVTPGQPANIPATSGDSAPG 425
AG P P P P PS A PG P N A APG
Sbjct: 164 AGPPGPAGNPGPKGPSGNAGADGQPGAPGNAGAAGAPGAPG 204
>Z75543-7|CAA99868.2| 139|Caenorhabditis elegans Hypothetical
protein K01D12.8 protein.
Length = 139
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 461 SRLSGSHGQDGGLAGRVRDGGSGHGLSGHTYQR---YGTDCY 577
S GS G GG G+ GG G G G Y+R T CY
Sbjct: 62 SESGGSGGSGGGKGGKGGSGGGGGGSGGKRYKRSKKKDTKCY 103
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRM--AGWLGESGTGAVGTGCPAIPTSGT 563
PG+ PPG + L G PG+ G+ AG+ G G +G P P GT
Sbjct: 310 PGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKG-NSGPPGPPGGGT 362
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 568 GTVPLVGMAGQPVPTAPV-PDSPSQPAI--LPVTPGQPANIPATSGDSAPGGW 419
GT L GM G+P P V P P QP + LP T G+ P G+ G+
Sbjct: 706 GTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGE-GGYPGRPGEVGQPGF 757
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 354 GSVSVGYSDWNGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGR-----MAGWLGESGT 518
G+V V N G +G PG PPGA + G PG+ GR M G+ G G
Sbjct: 93 GAVGVPGFPGNDGGNGR-PGEPGPPGAPGWDGCNGTDGAPGIPGRPGPPGMPGFPGPPGM 151
Query: 519 GAVGTGCPAIPTSG 560
+ G PAI +G
Sbjct: 152 DGL-KGEPAIGYAG 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PG PG + L G PGVTG + G LG G +GA G G P P
Sbjct: 898 PGQDGLPGVPGMKGEDGLPGLPGVTG-LKGDLGAPGQSGAPGLPGAPGYP 946
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRM--AGWLGESGTGAVGTGCPAIPTSGT 563
PG+ PPG + L G PG+ G+ AG+ G G +G P P GT
Sbjct: 309 PGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKG-NSGPPGPPGGGT 361
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 568 GTVPLVGMAGQPVPTAPV-PDSPSQPAI--LPVTPGQPANIPATSGDSAPGGW 419
GT L GM G+P P V P P QP + LP T G+ P G+ G+
Sbjct: 705 GTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGE-GGYPGRPGEVGQPGF 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 354 GSVSVGYSDWNGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGR-----MAGWLGESGT 518
G+V V N G +G PG PPGA + G PG+ GR M G+ G G
Sbjct: 93 GAVGVPGFPGNDGGNGR-PGEPGPPGAPGWDGCNGTDGAPGIPGRPGPPGMPGFPGPPGM 151
Query: 519 GAVGTGCPAIPTSG 560
+ G PAI +G
Sbjct: 152 DGL-KGEPAIGYAG 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PG PG + L G PGVTG + G LG G +GA G G P P
Sbjct: 897 PGQDGLPGVPGMKGEDGLPGLPGVTG-LKGDLGAPGQSGAPGLPGAPGYP 945
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P AP PD P+ PA +PG P N P + G P G
Sbjct: 224 GPAG--APGAPGPDGPAGPA---GSPGAPGN-PGSQGPQGPAG 260
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 408 PGSTHPPGAESPE-VAGIL--AGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG+ PG++ P+ AG AG PG G + TGA G GC P T P
Sbjct: 244 PGAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPG-GCDHCPPPRTAP 299
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P AP PD P+ PA +PG P N P + G P G
Sbjct: 286 GPAG--APGAPGPDGPAGPA---GSPGAPGN-PGSQGPQGPAG 322
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 408 PGSTHPPGAESPE-VAGIL--AGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG+ PG++ P+ AG AG PG G + TGA G GC P T P
Sbjct: 306 PGAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPG-GCDHCPPPRTAP 361
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRM--AGWLGESGTGAVGTGCPAIPTSGT 563
PG+ PPG + L G PG+ G+ AG+ G G +G P P GT
Sbjct: 309 PGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKG-NSGPPGPPGGGT 361
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 568 GTVPLVGMAGQPVPTAPV-PDSPSQPAI--LPVTPGQPANIPATSGDSAPGGW 419
GT L GM G+P P V P P QP + LP T G+ P G+ G+
Sbjct: 705 GTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGE-GGYPGRPGEVGQPGF 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 354 GSVSVGYSDWNGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGR-----MAGWLGESGT 518
G+V V N G +G PG PPGA + G PG+ GR M G+ G G
Sbjct: 93 GAVGVPGFPGNDGGNGR-PGEPGPPGAPGWDGCNGTDGAPGIPGRPGPPGMPGFPGPPGM 151
Query: 519 GAVGTGCPAIPTSG 560
+ G PAI +G
Sbjct: 152 DGL-KGEPAIGYAG 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PG PG + L G PGVTG + G LG G +GA G G P P
Sbjct: 897 PGQDGLPGVPGMKGEDGLPGLPGVTG-LKGDLGAPGQSGAPGLPGAPGYP 945
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRM--AGWLGESGTGAVGTGCPAIPTSGT 563
PG+ PPG + L G PG+ G+ AG+ G G +G P P GT
Sbjct: 310 PGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKG-NSGPPGPPGGGT 362
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 568 GTVPLVGMAGQPVPTAPV-PDSPSQPAI--LPVTPGQPANIPATSGDSAPGGW 419
GT L GM G+P P V P P QP + LP T G+ P G+ G+
Sbjct: 706 GTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGE-GGYPGRPGEVGQPGF 757
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 354 GSVSVGYSDWNGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGR-----MAGWLGESGT 518
G+V V N G +G PG PPGA + G PG+ GR M G+ G G
Sbjct: 93 GAVGVPGFPGNDGGNGR-PGEPGPPGAPGWDGCNGTDGAPGIPGRPGPPGMPGFPGPPGM 151
Query: 519 GAVGTGCPAIPTSG 560
+ G PAI +G
Sbjct: 152 DGL-KGEPAIGYAG 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PG PG + L G PGVTG + G LG G +GA G G P P
Sbjct: 898 PGQDGLPGVPGMKGEDGLPGLPGVTG-LKGDLGAPGQSGAPGLPGAPGYP 946
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 553 VGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDS 434
V M P+P P S PA +P+TP Q AN+ ++ S
Sbjct: 172 VQMPQMPIPVIPSFLKNSLPAPIPITPTQSANVERSNSPS 211
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 553 VGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDS 434
V M P+P P S PA +P+TP Q AN+ ++ S
Sbjct: 194 VQMPQMPIPVIPSFLKNSLPAPIPITPTQSANVERSNSPS 233
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P AP PD P+ PA +PG P N P + G P G
Sbjct: 223 GPAG--APGAPGPDGPAGPA---GSPGAPGN-PGSQGPQGPAG 259
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 408 PGSTHPPGAESPE-VAGIL--AGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG+ PG++ P+ AG AG PG G + TGA G GC P T P
Sbjct: 243 PGAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPG-GCDHCPPPRTAP 298
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P AP PD P+ PA +PG P N P + G P G
Sbjct: 223 GPAG--APGAPGPDGPAGPA---GSPGAPGN-PGSQGPQGPAG 259
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 408 PGSTHPPGAESPE-VAGIL--AGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG+ PG++ P+ AG AG PG G + TGA G GC P T P
Sbjct: 243 PGAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPG-GCDHCPPPRTAP 298
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P AP PD P+ PA +PG P N P + G P G
Sbjct: 224 GPAG--APGAPGPDGPAGPA---GSPGAPGN-PGSQGPQGPAG 260
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P AP PD P+ PA +PG P N P + G P G
Sbjct: 224 GPAG--APGAPGPDGPAGPA---GSPGAPGN-PGSQGPQGPAG 260
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 408 PGSTHPPGAESPE-VAGIL--AGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG+ PG++ P+ AG AG PG G + TGA G GC P T P
Sbjct: 244 PGAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPG-GCDHCPPPRTAP 299
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRM--AGWLGESGTGAVGTGCPAIPTSGT 563
PG+ PPG + L G PG+ G+ AG+ G G +G P P GT
Sbjct: 346 PGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKG-NSGPPGPPGGGT 398
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 568 GTVPLVGMAGQPVPTAPV-PDSPSQPAI--LPVTPGQPANIPATSGDSAPGGW 419
GT L GM G+P P V P P QP + LP T G+ P G+ G+
Sbjct: 742 GTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGE-GGYPGRPGEVGQPGF 793
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 354 GSVSVGYSDWNGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGR-----MAGWLGESGT 518
G+V V N G +G PG PPGA + G PG+ GR M G+ G G
Sbjct: 93 GAVGVPGFPGNDGGNGR-PGEPGPPGAPGWDGCNGTDGAPGIPGRPGPPGMPGFPGPPGM 151
Query: 519 GAVGTGCPAIPTSG 560
+ G PAI +G
Sbjct: 152 DGL-KGEPAIGYAG 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PG PG + L G PGVTG + G LG G +GA G G P P
Sbjct: 934 PGQDGLPGVPGMKGEDGLPGLPGVTG-LKGDLGAPGQSGAPGLPGAPGYP 982
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 553 VGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDS 434
V M P+P P S PA +P+TP Q AN+ ++ S
Sbjct: 194 VQMPQMPIPVIPSFLKNSLPAPIPITPTQSANVERSNSPS 233
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG PPG P+ G PG G+ G G++G G GC P T P
Sbjct: 264 PGPAGPPGDAGPD------GAPGNPGQ-PGAPGDAGAPGSGGGCDHCPPPRTAP 310
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P AP PD P+ PA +PG P N P + G P G
Sbjct: 223 GPAG--APGAPGPDGPAGPA---GSPGAPGN-PGSQGSQGPVG 259
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG+ G++ P AG PG G + TGA G GC P T P
Sbjct: 246 PGNPGSQGSQGPVGDNGAAGAPGQPGGNGNNGADGETGAPG-GCDHCPPPRTAP 298
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 384 NGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGRMA-GWLGESG-TGAVGT 533
N G DG PG + PG + P+ G PG GR A G G G GA GT
Sbjct: 167 NDGADGT-PGKSGAPGGKGPQGPPGTPGRPGQPGRKAIGEAGPKGPPGAPGT 217
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
Frame = -3
Query: 574 TIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPA-TSGDSAPGGWVLXXXXX 398
T P+V + PT+P S P+ + +P PAN+ T+ P
Sbjct: 607 TTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAP 666
Query: 397 XXXXXXSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQPPPLPQ 218
+ PT+ PV +P + + + T +T P T + I P P
Sbjct: 667 VNPTSPTTAPTV-PPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPV 725
Query: 217 *EPRS 203
+P S
Sbjct: 726 TQPAS 730
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical protein
C12D12.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
Frame = -3
Query: 574 TIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPA-TSGDSAPGGWVLXXXXX 398
T P+V + PT+P S P+ + +P PAN+ T+ P
Sbjct: 663 TTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAP 722
Query: 397 XXXXXXSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQPPPLPQ 218
+ PT+ PV +P + + + T +T P T + I P P
Sbjct: 723 VNPTSPTTAPTV-PPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPV 781
Query: 217 *EPRS 203
+P S
Sbjct: 782 TQPAS 786
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -3
Query: 598 NMHDKKYITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 428
++ KK++ + ++ + Q +P AP P +ILP P P +P + P
Sbjct: 463 SVEQKKHVALTSLEIDRCRAQGIPVAPAPVPKFLNSILPPPPAPPQFLPNPTDSFRP 519
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQ 467
P+P+ P PDSPS +LP G+
Sbjct: 208 PLPSLPPPDSPSSLVVLPAAAGK 230
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 538 QPV-PTAPVPDSPSQPAILPVTPGQPAN--IPATSGDSAPGG 422
+P+ P AP P P P P PGQP + P T G P G
Sbjct: 216 EPITPGAPGPAGPPGPQGPPGAPGQPGHDGQPGTPGPKGPNG 257
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQP--ANIPATSG-DSAPG 425
P P P P P P P PG P A P G D+APG
Sbjct: 144 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPG 183
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAIL-PVTPGQPANIPATSGDSAPGG 422
G AG P P P PAI P+TPG P P SG P G
Sbjct: 195 GEAGAPGPAG----EPGTPAISEPLTPGAPGE-PGDSGPPGPPG 233
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMA--GWLGESGTGAVGTGCP 542
PG+ PPG P+ A G PGV G+ G G +GT CP
Sbjct: 238 PGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGEKGICP 284
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 550 GMAGQPVPT--APVPDSPSQPAILPVTPGQPANIPATSGDS-APG 425
G AGQP A P +P Q +P TPG PA P + G + APG
Sbjct: 215 GPAGQPGSNGNAGAPGAPGQVVDVPGTPG-PAGPPGSPGPAGAPG 258
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -3
Query: 547 MAGQPVPTAPVPDSPSQP-----AILPVTPGQPANIPATSGDSAPGG 422
+ G P P P P QP A P PGQ ++P T G + P G
Sbjct: 204 LPGPPGPAGP-PGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPG 249
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 550 GMAGQPVPT--APVPDSPSQPAILPVTPGQPANIPATSGDS-APG 425
G AGQP A P +P Q +P TPG PA P + G + APG
Sbjct: 215 GPAGQPGSNGNAGAPGAPGQVVDVPGTPG-PAGPPGSPGPAGAPG 258
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -3
Query: 547 MAGQPVPTAPVPDSPSQP-----AILPVTPGQPANIPATSGDSAPGG 422
+ G P P P P QP A P PGQ ++P T G + P G
Sbjct: 204 LPGPPGPAGP-PGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPG 249
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 TGSVSVGYSDWNGG*DGCC-PGSTHPPGAESPEVAGILAGCPGVTG 485
TG G GG DGCC PG P G+ G PG G
Sbjct: 84 TGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPG 129
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +3
Query: 405 CPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIP 551
CPG PPG P AG G PG G G SG G G PA P
Sbjct: 150 CPG--GPPGPAGP--AG-PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 550 GMAGQPVPT--APVPDSPSQPAILPVTPGQPANIPATSGDS-APG 425
G AGQP A P +P Q +P TPG PA P + G + APG
Sbjct: 215 GPAGQPGSNGNAGAPGAPGQVVDVPGTPG-PAGPPGSPGPAGAPG 258
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -3
Query: 547 MAGQPVPTAPVPDSPSQP-----AILPVTPGQPANIPATSGDSAPGG 422
+ G P P P P QP A P PGQ ++P T G + P G
Sbjct: 204 LPGPPGPAGP-PGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPG 249
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 550 GMAGQPVPT--APVPDSPSQPAILPVTPGQPANIPATSGDS-APG 425
G AGQP A P +P Q +P TPG PA P + G + APG
Sbjct: 215 GPAGQPGSNGNAGAPGAPGQVVDVPGTPG-PAGPPGSPGPAGAPG 258
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -3
Query: 547 MAGQPVPTAPVPDSPSQP-----AILPVTPGQPANIPATSGDSAPGG 422
+ G P P P P QP A P PGQ ++P T G + P G
Sbjct: 204 LPGPPGPAGP-PGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPG 249
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 TGSVSVGYSDWNGG*DGCC-PGSTHPPGAESPEVAGILAGCPGVTG 485
TG G GG DGCC PG P G+ G PG G
Sbjct: 84 TGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPG 129
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +3
Query: 405 CPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIP 551
CPG PPG P AG G PG G G SG G G PA P
Sbjct: 150 CPG--GPPGPAGP--AG-PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQP--ANIPATSG-DSAPG 425
P P P P P P P PG P A P G D+APG
Sbjct: 139 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPG 178
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAIL-PVTPGQPANIPATSGDSAPGG 422
G AG P P P PAI P+TPG P P SG P G
Sbjct: 190 GEAGAPGPAG----EPGTPAISEPLTPGAPGE-PGDSGPPGPPG 228
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 TGSVSVGYSDWNGG*DGCC-PGSTHPPGAESPEVAGILAGCPGVTG 485
TG G GG DGCC PG P G+ G PG G
Sbjct: 84 TGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPG 129
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +3
Query: 405 CPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIP 551
CPG PPG P AG G PG G G SG G G PA P
Sbjct: 150 CPG--GPPGPAGP--AG-PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQP--ANIPATSG-DSAPG 425
P P P P P P P PG P A P G D+APG
Sbjct: 139 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPG 178
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAIL-PVTPGQPANIPATSGDSAPGG 422
G AG P P P PAI P+TPG P P SG P G
Sbjct: 190 GEAGAPGPAG----EPGTPAISEPLTPGAPGE-PGDSGPPGPPG 228
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 TGSVSVGYSDWNGG*DGCC-PGSTHPPGAESPEVAGILAGCPGVTG 485
TG G GG DGCC PG P G+ G PG G
Sbjct: 84 TGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPG 129
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +3
Query: 405 CPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIP 551
CPG PPG P AG G PG G G SG G G PA P
Sbjct: 150 CPG--GPPGPAGP--AG-PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -3
Query: 574 TIGTVPLVGMAGQPVPTAP--VPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
T G L G G P P P P P P PGQ +P T G + P G
Sbjct: 211 TPGGNALPGPPGPPGPQGPPGADGLPGNPGA-PGVPGQVIEVPGTPGPAGPPG 262
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 538 QPV-PTAPVPDSPSQPAILPVTPGQPAN--IPATSGDSAPGG 422
+P+ P AP P P+ P P PGQP + P G P G
Sbjct: 211 EPITPGAPGPAGPAGPQGQPGAPGQPGHDGQPGAPGPKGPNG 252
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -3
Query: 550 GMAGQPV-PTAPVPDSPSQPAILPV---TPGQPANIPATSGDSAPGG 422
G AG P P+ P P P PA P PGQP P G S+ GG
Sbjct: 186 GPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGG-PGQDGASSAGG 231
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +3
Query: 402 CCPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIP 551
C P PPG P+ G PG G A G SG G G PA P
Sbjct: 162 CQPCPAGPPGPPGPDGTPGEPGGPGPAGSPA---GPSGPGPAGPPGPAGP 208
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTSGTVP 569
PG P G P+ A AG PG GE+G G GC P T P
Sbjct: 260 PGPAGPAGDAGPDGAPGNAGAPGAP-------GEAGAPGSGGGCDHCPPPRTAP 306
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -3
Query: 568 GTVPLVGMAGQPVPTAPVPDSPSQPAI--LPVTPGQPANIPATSGDSAPGG 422
G P G G+ P P P + P P PG P + T G P G
Sbjct: 189 GNTPSRGGVGEAGPPGP-PGTSGNPGTDGAPGNPGAPGQVTETPGTPGPAG 238
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +3
Query: 402 CCPGSTHPPGAESPEVAGILAGCPGVTGR--MAGWLGESG-TGAVGT 533
C PG PPG P G PG G G +GE+G G GT
Sbjct: 162 CPPGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGT 208
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 550 GMAGQP-VPTAP-VPDSPSQPAILPVTPGQPANIPATSGDSA 431
G +G P P AP P P Q A P TPG P N A GD+A
Sbjct: 233 GGSGTPGQPGAPGAPGHPGQ-AGTPGTPGAPGNSGAPGGDAA 273
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 514 PDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
P P PA P PG P N A DS GG
Sbjct: 142 PAGPPGPAGTPGAPGAPGNAGAPGQDSFGGG 172
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 538 QPV-PTAPVPDSPSQPAILPVTPGQPAN--IPATSGDSAPGG 422
+P+ P AP P P+ P P PGQP + P G P G
Sbjct: 211 EPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNG 252
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 538 QPV-PTAPVPDSPSQPAILPVTPGQPAN--IPATSGDSAPGG 422
+P+ P AP P P+ P P PGQP + P G P G
Sbjct: 211 EPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNG 252
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 402 CCPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
C PG T PPG + G PG+ G+ G GE G G G TG P P
Sbjct: 197 CPPGQTGPPGFPGQKGPNGPRGSPGLQGQ-DGKKGEQGMPGPQGPTGRPGRP 247
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 538 QPV-PTAPVPDSPSQPAILPVTPGQPAN--IPATSGDSAPGG 422
+P+ P AP P P+ P P PGQP + P G P G
Sbjct: 211 EPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNG 252
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 538 QPV-PTAPVPDSPSQPAILPVTPGQPAN--IPATSGDSAPGG 422
+P+ P AP P P+ P P PGQP + P G P G
Sbjct: 211 EPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNG 252
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = -3
Query: 550 GMAGQPVPTAPVPD---SPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P P P + +P P P PG P APGG
Sbjct: 186 GPAGPPGPAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAPGG 231
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -3
Query: 547 MAGQPVPTAPVPDSPSQP-----AILPVTPGQPANIPATSGDSAPGG 422
+ G P P P P QP A P PGQ ++P T G + P G
Sbjct: 205 LPGPPGPAGP-PGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPG 250
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -3
Query: 547 MAGQPVPTAPVPDSPSQP-----AILPVTPGQPANIPATSGDSAPGG 422
+ G P P P P QP A P PGQ ++P T G + P G
Sbjct: 201 LPGPPGPAGP-PGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPG 246
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 559 PLVGMAGQPVPTAPVPDSPSQPAILPVTPG 470
P +G P P P P P QP + P PG
Sbjct: 145 PSMGRVPGPSPGGPQPPGPGQPQMRPGQPG 174
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 559 PLVGMAGQPVPTAPVPDSPSQPAILPVTPG 470
P +G P P P P P QP + P PG
Sbjct: 145 PSMGRVPGPSPGGPQPPGPGQPQMRPGQPG 174
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMA-----GWLGESGTGAVGTGCPA 545
PGS PGA P A + G PG G+ G G+ G A CPA
Sbjct: 222 PGSAGAPGAPGPAGAPGVDGQPGANGQPGPDGEQGHDGQPGPDAAYCPCPA 272
>AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical
protein Y59A8B.26 protein.
Length = 258
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 378 DWNGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAI-PT 554
D GG G G+T G + V G+ G TG + G G G GA G A+
Sbjct: 98 DLTGGLGGATGGATGALGGLTGTVGGLTNALGGATGGLGGLSGILG-GATGGATGALGGL 156
Query: 555 SGTV 566
+GTV
Sbjct: 157 TGTV 160
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 568 GTVPLVGMAGQPVPTAPV--PDSPSQPAI 488
GT+ +VG+AG+P P P+ P + +P +
Sbjct: 204 GTIAIVGLAGRPGPQGPLGEPGAQGEPGV 232
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P P P + + A P PG P + T G P G
Sbjct: 208 GPAGPPGPPGPAGNPGTDGA--PGNPGAPGQVTETPGTPGPAG 248
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQP--ANIPATSGDSAPGG 422
G G +P P PS P P PGQP A P G + G
Sbjct: 197 GEPGALLPGGDAPPGPSGPPGRPGAPGQPGKAGSPGQDGSNGDAG 241
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -3
Query: 523 APVPDSPSQPAILPVTPGQPA--NIPATSGDSAPGG 422
AP P PS P P PGQP P G PGG
Sbjct: 171 APGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGG 206
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGT-GCP 542
PG+ P G E A AG PG G G G+ GTG G G P
Sbjct: 171 PGAPGPAGPEGDAGAPGDAGAPGAPG-APGQDGQRGTGLPGAPGAP 215
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
P P PVP P Q + P P Q A P+ SG + G
Sbjct: 812 PYPGGPVPPGPPQNRMPPPPPAQGA--PSPSGAAGSNG 847
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQP--ANIPATSG-DSAPG 425
P P P P P P P PG P A P G D+ PG
Sbjct: 146 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPG 185
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 529 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVL 413
P P P+ P +P P TP P T S PGGW L
Sbjct: 48 PRPPRPNRPPRPP--PATPP-----PTTPAPSCPGGWSL 79
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +3
Query: 399 GCCPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCP 542
G PG P G P AG PG G AG G GT A CP
Sbjct: 229 GSGPGPEGPAGPPGPNGKDGEAGAPGKDGD-AGADGAPGTDAAYCPCP 275
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 6/39 (15%)
Frame = -3
Query: 523 APVPDSPSQPAILPVTPGQPAN-----IPATSGDS-APG 425
AP P PS P P PGQP N +P G S PG
Sbjct: 206 APGPQGPSGPVGQPGFPGQPGNDGNSGVPGIQGSSGGPG 244
>AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine
receptor, class j protein32 protein.
Length = 325
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 172 CKISISYCLSEKFRKYYFLVEYFARISNFAKFCDIF 65
C I ++Y K Y FL+ YFA + F DIF
Sbjct: 24 CFIYLTYAEKFKLGNYAFLLYYFAIFNIFHSLLDIF 59
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMA--GWLGESGT-GAVG-TGCPAIP 551
PG PPGA P + G PG G G GE+GT G G G P +P
Sbjct: 287 PGPQGPPGAIGPVGSRGTPGHPGEDGEAGAPGAPGENGTDGENGEDGVPGVP 338
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQP--ANIPATSG-DSAPG 425
P P P P P P P PG P A P G D+ PG
Sbjct: 146 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPG 185
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = -3
Query: 568 GTVPLVGMAGQPV--PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G L G G+P P P+ P QP P P P P SGD+ G
Sbjct: 121 GAPGLPGNPGRPPQQPCDPITPPPCQPC--PQGPPGPPGPPGPSGDAGSNG 169
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = -3
Query: 550 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 422
G AG P P A P +P P PGQ A D APGG
Sbjct: 223 GGAGAPGP-AGAPGAPGGPG----QPGQDGQPGAPGNDGAPGG 260
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PGST PG++ + L G G+ G GW G G G G G P P
Sbjct: 144 PGSTGQPGSKGEKGMEGLPGTNGLPG-APGWPGSKGEDGLPGRPGSPGFP 192
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 399 GCCPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTS 557
G T G G A G TG G SGTG+ GTG A TS
Sbjct: 880 GATGSGTSGSGTSESVTNGSGATESGSTGSGTTGTGTSGTGSSGTGASAARTS 932
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 399 GCCPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGTGCPAIPTS 557
G T G G A G TG G SGTG+ GTG A TS
Sbjct: 880 GATGSGTSGSGTSESVTNGSGATESGSTGSGTTGTGTSGTGSSGTGASAARTS 932
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVGT-GCP 542
PG+ PG++ A AG PG GR G G+ G G+ G G P
Sbjct: 181 PGAPGQPGSKGNNGAPGAAGGPGQPGR-PGKDGQRGKGSAGAPGAP 225
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 9/57 (15%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMA--GWLGESG-------TGAVGTGCPAIP 551
PG P G + PE G PG TG+ G +GE G +GA G PA P
Sbjct: 256 PGPAGPDGPQGPEGRSGKQGPPGPTGQEGEEGVIGEPGKPGEPGKSGAAGARGPAGP 312
>U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical
protein C54D2.1 protein.
Length = 373
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 535 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDS 434
PVPTAP +P+ P LP + P DS
Sbjct: 121 PVPTAPATVAPTAPTDLPTPAPEATTTPRRLFDS 154
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PGST PG++ + L G G+ G GW G G G G G P P
Sbjct: 144 PGSTGQPGSKGEKGMEGLPGTNGLPG-APGWPGSKGEDGLPGRPGSPGFP 192
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 408 PGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESG-TGAVG-TGCPAIP 551
PGST PG++ + L G G+ G GW G G G G G P P
Sbjct: 144 PGSTGQPGSKGEKGMEGLPGTNGLPG-APGWPGSKGEDGLPGRPGSPGFP 192
>AL132898-20|CAC14415.2| 243|Caenorhabditis elegans Hypothetical
protein Y59A8B.19 protein.
Length = 243
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 378 DWNGG*DGCCPGSTHPPGAESPEVAGILAGCPGVTGRMAGWLGESGTGAVG 530
D GG G G+T G + V G+ G TG + G G G GA G
Sbjct: 98 DLTGGLGGATGGATGALGGLTGTVGGLTNALEGATGGLGGLSGILG-GAAG 147
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -1
Query: 411 RDNSRLNLHSNHYILRLLNQFTKNLRIQYEPFRTGATVTTL*YARQTSLRIILRMQLFNH 232
RD L L ++H I + + K+L+ +EP A + + Y R L L LF +
Sbjct: 1189 RDTPPLPLAASHCISMIFSSIYKDLK--WEPPVQNAATSPMAYGRYIELLTQLNHSLFEN 1246
Query: 231 PRFLNKSL 208
R N +L
Sbjct: 1247 GRCSNPAL 1254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,459,730
Number of Sequences: 27780
Number of extensions: 428662
Number of successful extensions: 2584
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2520
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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