Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_E16
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           30   1.9  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   1.9  
09_02_0495 + 9880714-9881196                                           29   4.4  
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    29   4.4  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -2

Query: 702 GGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTP 601
           GG PPG        PF  G PP P GP      P
Sbjct: 226 GGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNP 259


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
 Frame = +3

Query: 561  SPKXXGPGPPXK-NXGXSXGGGAPXXXXGXPXKKGXXXXXPXPP--GEXXLXXXPPPXGX 731
            +P    P PP + N      GG P      P   G     P PP  G       PPP G 
Sbjct: 1059 APSPPSPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGI 1118

Query: 732  XG 737
             G
Sbjct: 1119 TG 1120



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/53 (30%), Positives = 17/53 (32%)
 Frame = +3

Query: 579  PGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXG 737
            P PP +  G   G   P      P   G     P PPG   L   P   G  G
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRGVVG 1237


>09_02_0495 + 9880714-9881196
          Length = 160

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -2

Query: 693 PPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGF 595
           PPG        PF  G P  P  PPP    P F
Sbjct: 83  PPGVMPGAFAPPFGGGFPYGPAPPPPNPILPWF 115


>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/48 (31%), Positives = 16/48 (33%)
 Frame = +3

Query: 579 PGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPP 722
           P PP    G + GGGAP      P           PP        PPP
Sbjct: 3   PPPPPPQAGVAGGGGAPPQWGAIPPPVPHQQQQYAPPPPQMWGQAPPP 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,494
Number of Sequences: 37544
Number of extensions: 269660
Number of successful extensions: 608
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)