Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E16
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 37 0.020
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.026
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 35 0.060
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.10
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.42
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.42
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.42
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 32 0.56
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 32 0.56
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.97
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.97
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 31 0.97
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.97
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.97
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.3
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 31 1.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.7
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 1.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 1.7
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 3.0
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.9
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 29 3.9
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 29 3.9
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 3.9
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.2
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 28 6.8
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 28 6.8
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 28 6.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 9.0
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 9.0
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 9.0
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 28 9.0
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 36.7 bits (81), Expect = 0.020
Identities = 23/48 (47%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 702 GGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPG-FXXGARGPGXSG 562
G FPPG G M F G P PGGP PG F GA GPG G
Sbjct: 283 GAFPPGQGGPGMPGSFPPG-APGPGGP----GMPGSFAPGAPGPGGPG 325
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = -2
Query: 720 GGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXG--ARGPGXSG 562
GG G FPPG G G P PG P PG G + GPG G
Sbjct: 290 GGPGMPGSFPPGAPG--------PGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPG 336
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -2
Query: 696 FPPGXXGXXMXXPFFXGX-PPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
FPPG P G PP GGP P G GPG G+ P
Sbjct: 269 FPPGASAPVA--PGMPGAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAP 316
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSG 562
P GG G PPG G P G PP PP PG ARGP +G
Sbjct: 426 PQGGPGGFGPPPPGGPGAYGPPP--TGFPPVGAPPPGAAGAPGGNPFARGPSATG 478
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -2
Query: 693 PPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSG 562
PPG G G P P GPP PG GA GPG G
Sbjct: 272 PPGLAGPDGQPGHGGGGQPGPQGPPGDDGHPGEDGGAGGPGQPG 315
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Frame = -2
Query: 726 PXGGXXXXGGFPP----GXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPG 571
P G GG PP M P G PP GGPP P F G GPG
Sbjct: 1458 PLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPG 1513
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTP 601
P GG G PP G G PP GGPPP P
Sbjct: 1562 PHGGMNGWRGGPPPPRGGSHCQ----GPPPLMGGPPPRLGMP 1599
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 702 GGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPG 598
GG PP G P G PP GGPPP PG
Sbjct: 733 GGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPG 766
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFXG---XPPXPGG---PPPXXXTPGFXXGARGPGXS 565
P GG G PP P G PP PGG PPP GF G P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 564 GTXXPL 547
G P+
Sbjct: 791 GMFAPM 796
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -2
Query: 720 GGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGP 574
GG G PP G P G PP GGPPP G + GP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGP 758
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 638 GGXPXKKGXXXXXPXXPGGXPPXXXXPPXG 727
GG P G P PGG PP PP G
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 564 PKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPP 722
P GP PP + G P G P G P P G + PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXPL 547
PP GGPPP P G P G P+
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPI 738
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 702 GGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPG 598
GG PP G P G PP GGPPP PG
Sbjct: 733 GGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPG 766
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFXG---XPPXPGG---PPPXXXTPGFXXGARGPGXS 565
P GG G PP P G PP PGG PPP GF G P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 564 GTXXPL 547
G P+
Sbjct: 791 GMFAPM 796
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -2
Query: 720 GGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGP 574
GG G PP G P G PP GGPPP G + GP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGP 758
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 638 GGXPXKKGXXXXXPXXPGGXPPXXXXPPXG 727
GG P G P PGG PP PP G
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 564 PKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPP 722
P GP PP + G P G P G P P G + PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXPL 547
PP GGPPP P G P G P+
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPI 738
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 702 GGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPG 598
GG PP G P G PP GGPPP PG
Sbjct: 316 GGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPG 349
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFXG---XPPXPGG---PPPXXXTPGFXXGARGPGXS 565
P GG G PP P G PP PGG PPP GF G P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Query: 564 GTXXPL 547
G P+
Sbjct: 374 GMFAPM 379
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -2
Query: 720 GGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGP 574
GG G PP G P G PP GGPPP G + GP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGP 341
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 638 GGXPXKKGXXXXXPXXPGGXPPXXXXPPXG 727
GG P G P PGG PP PP G
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 564 PKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPP 722
P GP PP + G P G P G P P G + PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXPL 547
PP GGPPP P G P G P+
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPI 321
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 546 KGXXXSPKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPX 725
KG +P GP P G GAP + P PPG+ P P
Sbjct: 164 KGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPP 223
Query: 726 GXXG 737
G G
Sbjct: 224 GSNG 227
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
P GG G PPG G P G P PG P TPG A G G P
Sbjct: 202 PSGGGEGPAG-PPGPPGPA-GNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGP 258
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXGXKXXXXX 758
PGPP G GAP G P G P PG P P G G
Sbjct: 213 PGPPGP-AGNPGTDGAP----GNPGAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGA 267
Query: 759 KKXGXXGP 782
+ G GP
Sbjct: 268 SEPGPAGP 275
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
P P GPP PG G GPG +G P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +3
Query: 549 GXXXSPKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXG 728
G P GP P G + GAP G P + G PGE P P G
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEPG--ASEQGGPGEPGPAGPPGPAG 230
Query: 729 XXGXKXXXXXKKXGXXGP 782
G G GP
Sbjct: 231 PAGNDGAPGTGGPGPAGP 248
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
P P GPP PG G GPG +G P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +3
Query: 549 GXXXSPKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXG 728
G P GP P G + GAP G P + G PGE P P G
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEPG--ASEQGGPGEPGPAGPPGPAG 230
Query: 729 XXGXKXXXXXKKXGXXGP 782
G G GP
Sbjct: 231 PAGNDGAPGTGGPGPAGP 248
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXGXKXXXXX 758
PGPP + G GAP G P G P PG P P G G
Sbjct: 203 PGPPGTS-GNPGTDGAP----GNPGAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGA 257
Query: 759 KKXGXXGP 782
+ G GP
Sbjct: 258 SEPGPAGP 265
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 720 GGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
GG G PPG G P G P PG P TPG A G G P
Sbjct: 195 GGVGEAG--PPGPPGTS-GNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGP 248
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
P P GPP PG G GPG +G P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +3
Query: 549 GXXXSPKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXG 728
G P GP P G + GAP G P + G PGE P P G
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEPG--ASEQGGPGEPGPAGPPGPAG 230
Query: 729 XXGXKXXXXXKKXGXXGP 782
G G GP
Sbjct: 231 PAGNDGAPGTGGPGPAGP 248
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
P P GPP PG G GPG +G P
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGPGPAGPPGP 190
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +3
Query: 549 GXXXSPKXXGPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXG 728
G P GP P G + GAP G P + G PGE P P G
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEPG--ASEQGGPGEPGPAGPPGPAG 230
Query: 729 XXGXKXXXXXKKXGXXGP 782
G G GP
Sbjct: 231 PAGNDGAPGTGGPGPAGP 248
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 693 PPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSG 562
PPG G PP P GPP PG GPG G
Sbjct: 259 PPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDG 302
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 693 PPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSGT 559
PPG G + PP P GPP PG A PG G+
Sbjct: 195 PPGEPGALLPG---GDAPPGPSGPPGRPGAPGQPGKAGSPGQDGS 236
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 720 GGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSG 562
GG GG G G PP PGG P TPG PG SG
Sbjct: 97 GGGGGGGGEAAGGGGGCTGC--CNPGPPGPGGRPGKPGTPGKPGAPGNPGASG 147
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFX-GXPPXPGG---PPPXXXTPGFXXGARGPG 571
P G GG PPG G G PP GG PPP PG G GPG
Sbjct: 164 PRGPPGGMGG-PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFX-GXPPXPGG---PPPXXXTPGFXXGARGPG 571
P G GG PPG G G PP GG PPP PG G GPG
Sbjct: 444 PRGPPGGMGG-PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 693 PPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSG 562
P G G P PP P GPP G GPG G
Sbjct: 193 PAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAPGGPGTDG 236
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -2
Query: 693 PPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSGT 559
PPG G PP P GPP G PG GT
Sbjct: 190 PPGPAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAPGGPGT 234
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXGXKXXXXX 758
PGPP G G P G P G P PG P P G G
Sbjct: 221 PGPPGPQ-GPPGADGLPGNP-GAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGS 278
Query: 759 KKXGXXGP 782
+ G GP
Sbjct: 279 SQPGPQGP 286
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP P GPP PG A PG G
Sbjct: 208 PPGPAGPPGPSGQPGSNGNAGAPGAPG 234
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = +3
Query: 549 GXXXSPKXXGP-GPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPX 725
G P GP GPP + G A G P G P PG P P
Sbjct: 201 GGASLPGPPGPAGPPGPSGQPGSNGNA-----GAPGAPGQVVDVPGTPGPAGPPGPPGPA 255
Query: 726 GXXGXKXXXXXKKXGXXGP 782
G G + G GP
Sbjct: 256 GAPGQPGQSGSAQPGGPGP 274
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP P GPP PG A PG G
Sbjct: 204 PPGPAGPPGPSGQPGSNGNAGAPGAPG 230
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = +3
Query: 549 GXXXSPKXXGP-GPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPX 725
G P GP GPP + G A G P G P PG P P
Sbjct: 197 GGASLPGPPGPAGPPGPSGQPGSNGNA-----GAPGAPGQVVDVPGTPGPAGPPGPPGPA 251
Query: 726 GXXGXKXXXXXKKXGXXGP 782
G G + G GP
Sbjct: 252 GAPGQPGQSGSGQPGGPGP 270
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP P GPP PG A PG G
Sbjct: 207 PPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXX--GXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXGXKXXX 752
PGPP G G P G P G P PG P P G G
Sbjct: 205 PGPPGP-AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQA 263
Query: 753 XXKKXGXXGP 782
+ G GP
Sbjct: 264 GSSQPGGPGP 273
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP P GPP PG A PG G
Sbjct: 207 PPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXX--GXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXGXKXXX 752
PGPP G G P G P G P PG P P G G
Sbjct: 205 PGPPGP-AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQA 263
Query: 753 XXKKXGXXGP 782
+ G GP
Sbjct: 264 GSSQPGGPGP 273
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP P GPP PG A PG G
Sbjct: 207 PPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXX--GXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXGXKXXX 752
PGPP G G P G P G P PG P P G G
Sbjct: 205 PGPPGP-AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQA 263
Query: 753 XXKKXGXXGP 782
+ G GP
Sbjct: 264 GSSQPGGPGP 273
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP P GPP PG A PG G
Sbjct: 207 PPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXX--GXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXGXKXXX 752
PGPP G G P G P G P PG P P G G
Sbjct: 205 PGPPGP-AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQA 263
Query: 753 XXKKXGXXGP 782
+ G GP
Sbjct: 264 GSSQPGGPGP 273
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP P GPP PG A PG G
Sbjct: 205 PPGPAGPPGPSGQPGSNGNAGAPGAPG 231
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
P P GPP G G GPG +G P
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGP 203
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
P P GPP G G GPG +G P
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGP 203
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +3
Query: 576 GPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXG 737
GP P + G + G G P K+G PP E + P P G G
Sbjct: 121 GPPGPAGDTGPN-GNDGHHGAPGVPGKEGSILSSALPPSEPCIICPPGPQGAVG 173
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +3
Query: 576 GPGPPXKNXGXSXGGGAPXXXXGXPXKKGXXXXXPXPPGEXXLXXXPPPXGXXG 737
GP P + G + G G P K+G PP E + P P G G
Sbjct: 121 GPPGPAGDTGPN-GNDGHHGAPGVPGKEGSILSSALPPSEPCIICPPGPQGAVG 173
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 648 GXPPXPGGPPPXXXTPGFXXGARGPGXSGT 559
G PP P GPP PG PG GT
Sbjct: 97 GCPPGPPGPPGSEGHPGDSGVPGNPGQPGT 126
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 579 PGPPXKNXGXSXGGGAPXXXXGXPXKKG 662
PGPP + G S G P G P K G
Sbjct: 224 PGPPGNDLGNSNGPPGPPGQMGQPGKPG 251
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXX-MXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSG 562
P GG G PPG G P G P P GP G GA PG G
Sbjct: 151 PAGGPGPKG--PPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPG 204
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = -2
Query: 726 PXGGXXXXGGFPPGXXGXXMXXPFFXGXPPXPG--GPPPXXXTPGF--XXGARG-PGXSG 562
P G G PPG G M P G P PG GPP PG+ G +G G SG
Sbjct: 158 PPGAPGPNG--PPGYEGQ-MGVPGLPGDGPTPGSPGPPGPPGPPGYPGRQGCQGKDGPSG 214
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 720 GGXXXXGGFPPGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSG 562
GG GG G G P PP P GPP G PG +G
Sbjct: 118 GGGYGGGG---GGGGGCQCSPSSNTCPPGPRGPPGQAGLDGLPGAPGQPGSNG 167
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -2
Query: 690 PGXXGXXMXXPFFXGXPPXPGGPPPXXXTPGFXXGARGPGXSGTXXP 550
PG G PP P GPP G G G G G P
Sbjct: 241 PGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGP 287
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 642 PPXPGGPPPXXXTPGFXXGARGPGXSG 562
PP GPP TPG A PG G
Sbjct: 88 PPGEAGPPGAPGTPGADGEAGNPGKDG 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,960,914
Number of Sequences: 27780
Number of extensions: 250842
Number of successful extensions: 1503
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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