Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_E15
         (816 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M59217-1|AAA51685.1|  584|Homo sapiens alpha-1 type XIII collage...    31   5.0  
BC026693-1|AAH26693.1|  343|Homo sapiens TMBIM1 protein protein.       30   8.7  
BC026348-1|AAH26348.1|  311|Homo sapiens transmembrane BAX inhib...    30   8.7  
BC013428-1|AAH13428.1|  311|Homo sapiens transmembrane BAX inhib...    30   8.7  
BC007980-1|AAH07980.1|  311|Homo sapiens transmembrane BAX inhib...    30   8.7  
AF193045-1|AAG22473.1|  311|Homo sapiens unknown protein.              30   8.7  
AB257295-1|BAE93467.1|  311|Homo sapiens responsive to centrifug...    30   8.7  

>M59217-1|AAA51685.1|  584|Homo sapiens alpha-1 type XIII collagen
           protein.
          Length = 584

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
 Frame = -3

Query: 640 GXXNKXRVPXGKXXXRXPWXGGSPGQF---------PAGXPATEGFPG-PEPXXXTGFP 494
           G   +  +P  K     P   GSPG           P G P T GFPG P P    GFP
Sbjct: 42  GPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGFP 100


>BC026693-1|AAH26693.1|  343|Homo sapiens TMBIM1 protein protein.
          Length = 343

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 589 PWXGGSPGQFPAGXPATEGFPGPEPXXXTGFPXXCP 482
           P   G P   P G PA  G+P P      G+P   P
Sbjct: 55  PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP 90


>BC026348-1|AAH26348.1|  311|Homo sapiens transmembrane BAX
           inhibitor motif containing 1 protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 589 PWXGGSPGQFPAGXPATEGFPGPEPXXXTGFPXXCP 482
           P   G P   P G PA  G+P P      G+P   P
Sbjct: 23  PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP 58


>BC013428-1|AAH13428.1|  311|Homo sapiens transmembrane BAX
           inhibitor motif containing 1 protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 589 PWXGGSPGQFPAGXPATEGFPGPEPXXXTGFPXXCP 482
           P   G P   P G PA  G+P P      G+P   P
Sbjct: 23  PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP 58


>BC007980-1|AAH07980.1|  311|Homo sapiens transmembrane BAX
           inhibitor motif containing 1 protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 589 PWXGGSPGQFPAGXPATEGFPGPEPXXXTGFPXXCP 482
           P   G P   P G PA  G+P P      G+P   P
Sbjct: 23  PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP 58


>AF193045-1|AAG22473.1|  311|Homo sapiens unknown protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 589 PWXGGSPGQFPAGXPATEGFPGPEPXXXTGFPXXCP 482
           P   G P   P G PA  G+P P      G+P   P
Sbjct: 23  PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP 58


>AB257295-1|BAE93467.1|  311|Homo sapiens responsive to centrifugal
           force and shear stress gene 1 protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 589 PWXGGSPGQFPAGXPATEGFPGPEPXXXTGFPXXCP 482
           P   G P   P G PA  G+P P      G+P   P
Sbjct: 23  PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,093,141
Number of Sequences: 237096
Number of extensions: 1002347
Number of successful extensions: 5738
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5482
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)