Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E11
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-9|AAF60887.2| 301|Caenorhabditis elegans Hypothetical ... 83 2e-16
AC024876-10|AAP31418.1| 193|Caenorhabditis elegans Hypothetical... 69 4e-12
AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical ... 34 0.13
Z82268-7|CAB05196.2| 138|Caenorhabditis elegans Hypothetical pr... 29 2.8
U23527-1|AAC46575.2| 1147|Caenorhabditis elegans Neuronal igcam ... 29 3.7
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 29 3.7
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 29 3.7
AF106584-2|AAC78222.2| 316|Caenorhabditis elegans Hypothetical ... 29 3.7
AC006794-5|AAK68502.1| 821|Caenorhabditis elegans Hypothetical ... 29 4.9
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 28 8.6
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 28 8.6
>AC024876-9|AAF60887.2| 301|Caenorhabditis elegans Hypothetical
protein Y94H6A.9a protein.
Length = 301
Score = 83.4 bits (197), Expect = 2e-16
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Frame = -1
Query: 671 PQQQEQVRLVRLCLYREGFTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQGVSVRVS 492
P +E + L L L+ +G +++ GPL DP EFL + +GEIP L Q +
Sbjct: 84 PSGRETISLT-LHLWSDGLSIEDGPLMSRQDPRTIEFLESVGKGEIPPSLVQQYPGKEID 142
Query: 491 LEDSRHEECPRHVV-KPQAFAGKGHMLGSPTPPXXXXXXXXXXXXXXXXAN--------- 342
+ +RH E +V K + F G G LG+ P A
Sbjct: 143 FKVNRHHE--EYVAPKMKPFGGSGVRLGNVVPTVLGQSSSSATTAGTSSATTDHNPDHTA 200
Query: 341 ------LRAAQSAVTLDETQPVTTLQFRLADGTRITGRFNHSHTVGALREFVSRAEPAYQ 180
L A+ ++ + +P T +Q RL + R+ G FNHSHT+ A+R F+ A P
Sbjct: 201 ENEAKQLEDAKKELSTNMNEPTTNIQIRLPNNQRLVGIFNHSHTLEAVRTFICTARPDMI 260
Query: 179 LRPFSLLTAFPSAELGDDA 123
PF ++ A+P D++
Sbjct: 261 YAPFQMMAAYPPKPFEDES 279
>AC024876-10|AAP31418.1| 193|Caenorhabditis elegans Hypothetical
protein Y94H6A.9b protein.
Length = 193
Score = 68.9 bits (161), Expect = 4e-12
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Frame = -1
Query: 581 DPENAEFLSCIRRGEIPSELSGQGVSVRVSLEDSRHEECPRHVV-KPQAFAGKGHMLGSP 405
DP EFL + +GEIP L Q + + +RH E +V K + F G G LG+
Sbjct: 5 DPRTIEFLESVGKGEIPPSLVQQYPGKEIDFKVNRHHE--EYVAPKMKPFGGSGVRLGNV 62
Query: 404 TPPXXXXXXXXXXXXXXXXAN---------------LRAAQSAVTLDETQPVTTLQFRLA 270
P A L A+ ++ + +P T +Q RL
Sbjct: 63 VPTVLGQSSSSATTAGTSSATTDHNPDHTAENEAKQLEDAKKELSTNMNEPTTNIQIRLP 122
Query: 269 DGTRITGRFNHSHTVGALREFVSRAEPAYQLRPFSLLTAFPSAELGDDA 123
+ R+ G FNHSHT+ A+R F+ A P PF ++ A+P D++
Sbjct: 123 NNQRLVGIFNHSHTLEAVRTFICTARPDMIYAPFQMMAAYPPKPFEDES 171
>AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical
protein F23C8.4 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -1
Query: 293 TTLQFRLADGTRITGRFNHSHTVGALREFVSRAEPAYQLRPFSLLTAFPSAELGDD 126
TTLQFRL DG + +F + + +R +V A + PF+L+T FP +D
Sbjct: 223 TTLQFRLLDGQTVRQQFEANEPLAMVRAWV-ETNHANGV-PFTLMTPFPRKVFTED 276
>Z82268-7|CAB05196.2| 138|Caenorhabditis elegans Hypothetical
protein F52B11.6 protein.
Length = 138
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 53 LLVSLLEPLHDRRVEQVRLRQGSRRRHPAPRSGRPSAD*MAAAGTPAPLATRTPS 217
L+++LL L ++ + R+ + RH + + + A TPAP T+ PS
Sbjct: 7 LIIALLLTLFISGIDSLPFRKHNNHRHLKNQKAQQLKEEATEAPTPAPTTTKAPS 61
>U23527-1|AAC46575.2| 1147|Caenorhabditis elegans Neuronal igcam
protein 1, isoform a protein.
Length = 1147
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 617 FTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQGVSVRVSLEDSRH-EECPRHVVKP 444
F D+G +P +A F CI R E ++ V + + +S E+ P V+KP
Sbjct: 194 FITDSGMQISLVNPSDAGFYHCIVRNEYTNQTRKSPKPVLIIVTESNSTEKAPTEVIKP 252
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 705 LQMITSQCLHRSTTTRASETGETVSVPRRLHGGRGSAAPLQRPGERGVPE 556
L+ +T L+ ++ RAS GET P L G G+AA L G PE
Sbjct: 2188 LKSVTRASLNSISSQRASNAGETAQ-PSVLCAGSGNAALLTIAAAIGEPE 2236
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 705 LQMITSQCLHRSTTTRASETGETVSVPRRLHGGRGSAAPLQRPGERGVPE 556
L+ +T L+ ++ RAS GET P L G G+AA L G PE
Sbjct: 2188 LKSVTRASLNSISSQRASNAGETAQ-PSVLCAGSGNAALLTIAAAIGEPE 2236
>AF106584-2|AAC78222.2| 316|Caenorhabditis elegans Hypothetical
protein F54A5.3a protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 623 EGFTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQ 513
+GFTV A P+RH S F+S R + ++ G+
Sbjct: 173 DGFTVPAPPMRHRSSLHRQSFVSNCRAPTVTEDVVGK 209
>AC006794-5|AAK68502.1| 821|Caenorhabditis elegans Hypothetical
protein Y50D4A.1 protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 584 SDPENAEFLSCIRRGEIPSELSGQGVSVRV 495
SDPENAEFLS + + SG ++V++
Sbjct: 509 SDPENAEFLSIKEARKTVEDASGCKIAVKI 538
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 168 EWPQLVRRLRSRHELPQRADRVAVVEPARDAGAVGQSELQRSDGLRFVECDGALCGAE 341
EW +L + +E+ RA+ VAV + +DA Q+ +R +C A C ++
Sbjct: 1486 EWKKLSEEQKKHYEM--RAEVVAVEKAKQDAIKASQAMTLLPGQVRIYQCKWAACDSQ 1541
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 168 EWPQLVRRLRSRHELPQRADRVAVVEPARDAGAVGQSELQRSDGLRFVECDGALCGAE 341
EW +L + +E+ RA+ VAV + +DA Q+ +R +C A C ++
Sbjct: 1486 EWKKLSEEQKKHYEM--RAEVVAVEKAKQDAIKASQAMTLLPGQVRIYQCKWAACDSQ 1541
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 168 EWPQLVRRLRSRHELPQRADRVAVVEPARDAGAVGQSELQRSDGLRFVECDGALCGAE 341
EW +L + +E+ RA+ VAV + +DA Q+ +R +C A C ++
Sbjct: 116 EWKKLSEEQKKHYEM--RAEVVAVEKAKQDAIKASQAMTLLPGQVRIYQCKWAACDSQ 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,752,198
Number of Sequences: 27780
Number of extensions: 227850
Number of successful extensions: 833
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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