Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E09
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK022027-1|BAB13955.1| 234|Homo sapiens protein ( Homo sapiens ... 57 6e-08
AK001440-1|BAA91692.1| 234|Homo sapiens protein ( Homo sapiens ... 57 6e-08
AF346603-1|AAK29084.1| 476|Homo sapiens Sec61 alpha form 2 prot... 57 6e-08
AL831940-1|CAD38592.1| 215|Homo sapiens hypothetical protein pr... 56 1e-07
AK075148-1|BAC11434.1| 170|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AK074928-1|BAC11298.1| 356|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AK074907-1|BAC11283.1| 170|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AF346602-1|AAK29083.1| 476|Homo sapiens Sec61 alpha form 1 prot... 56 1e-07
AF084458-1|AAD39847.1| 476|Homo sapiens sec61 homolog protein. 56 1e-07
BC026179-1|AAH26179.1| 418|Homo sapiens SEC61A2 protein protein. 33 0.91
AK022640-1|BAB14148.1| 437|Homo sapiens protein ( Homo sapiens ... 33 0.91
>AK022027-1|BAB13955.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ11965 fis, clone HEMBB1001112, moderately
similar to Homo sapiens sec61 homolog mRNA. ).
Length = 234
Score = 57.2 bits (132), Expect = 6e-08
Identities = 48/137 (35%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 96 VGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 155
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 156 QMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 212
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQ+E+ GM
Sbjct: 213 YQYFEIFVKEQAEVGGM 229
Score = 34.7 bits (76), Expect = 0.40
Identities = 26/72 (36%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG RD SM+ P +GA SVL G G
Sbjct: 151 QLKEQQMVMRGHRDTSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 209
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 210 TIIYQYFEIFVK 221
>AK001440-1|BAA91692.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ10578 fis, clone NT2RP2003433, highly similar to
PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT. ).
Length = 234
Score = 57.2 bits (132), Expect = 6e-08
Identities = 48/137 (35%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 96 VGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 155
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 156 QMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 212
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQ+E+ GM
Sbjct: 213 YQYFEIFVKEQAEVGGM 229
Score = 34.7 bits (76), Expect = 0.40
Identities = 26/72 (36%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG RD SM+ P +GA SVL G G
Sbjct: 151 QLKEQQMVMRGHRDTSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 209
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 210 TIIYQYFEIFVK 221
>AF346603-1|AAK29084.1| 476|Homo sapiens Sec61 alpha form 2
protein.
Length = 476
Score = 57.2 bits (132), Expect = 6e-08
Identities = 48/137 (35%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 338 VGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 397
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 398 QMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 454
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQ+E+ GM
Sbjct: 455 YQYFEIFVKEQAEVGGM 471
Score = 34.7 bits (76), Expect = 0.40
Identities = 26/72 (36%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG RD SM+ P +GA SVL G G
Sbjct: 393 QLKEQQMVMRGHRDTSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 451
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 452 TIIYQYFEIFVK 463
>AL831940-1|CAD38592.1| 215|Homo sapiens hypothetical protein
protein.
Length = 215
Score = 56.4 bits (130), Expect = 1e-07
Identities = 48/137 (35%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 77 VGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 136
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 137 QMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 193
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQSE+ M
Sbjct: 194 YQYFEIFVKEQSEVGSM 210
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG R+ SM+ P +GA SVL G G
Sbjct: 132 QLKEQQMVMRGHRETSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 190
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 191 TIIYQYFEIFVK 202
>AK075148-1|BAC11434.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ90667 fis, clone PLACE1005410, highly similar to
Protein transport protein Sec61 alpha subunitisoform 1.
).
Length = 170
Score = 56.4 bits (130), Expect = 1e-07
Identities = 48/137 (35%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 32 VGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 91
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 92 QMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 148
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQSE+ M
Sbjct: 149 YQYFEIFVKEQSEVGSM 165
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG R+ SM+ P +GA SVL G G
Sbjct: 87 QLKEQQMVMRGHRETSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 145
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 146 TIIYQYFEIFVK 157
>AK074928-1|BAC11298.1| 356|Homo sapiens protein ( Homo sapiens
cDNA FLJ90447 fis, clone NT2RP3001240, highly similar to
Canis familiaris sec61 homologue mRNA. ).
Length = 356
Score = 56.4 bits (130), Expect = 1e-07
Identities = 48/137 (35%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 218 VGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 277
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 278 QMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 334
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQSE+ M
Sbjct: 335 YQYFEIFVKEQSEVGSM 351
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG R+ SM+ P +GA SVL G G
Sbjct: 273 QLKEQQMVMRGHRETSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 331
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 332 TIIYQYFEIFVK 343
>AK074907-1|BAC11283.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ90426 fis, clone NT2RP3000460, highly similar to
Protein transport protein Sec61 alpha subunitisoform 1.
).
Length = 170
Score = 56.4 bits (130), Expect = 1e-07
Identities = 48/137 (35%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 32 VGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 91
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 92 QMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 148
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQSE+ M
Sbjct: 149 YQYFEIFVKEQSEVGSM 165
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG R+ SM+ P +GA SVL G G
Sbjct: 87 QLKEQQMVMRGHRETSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 145
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 146 TIIYQYFEIFVK 157
>AF346602-1|AAK29083.1| 476|Homo sapiens Sec61 alpha form 1
protein.
Length = 476
Score = 56.4 bits (130), Expect = 1e-07
Identities = 48/137 (35%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 338 VGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 397
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 398 QMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 454
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQSE+ M
Sbjct: 455 YQYFEIFVKEQSEVGSM 471
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG R+ SM+ P +GA SVL G G
Sbjct: 393 QLKEQQMVMRGHRETSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 451
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 452 TIIYQYFEIFVK 463
>AF084458-1|AAD39847.1| 476|Homo sapiens sec61 homolog protein.
Length = 476
Score = 56.4 bits (130), Expect = 1e-07
Identities = 48/137 (35%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTXEGT 552
+ G Y S PES D M S A K I+VSGSSAKDV +
Sbjct: 338 VGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQ 397
Query: 551 PD--GDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 398 QMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVL---ADFLGAIGSGTGILLAVTII 454
Query: 377 YQYCRDICQEQSEMXGM 327
YQY +EQSE+ M
Sbjct: 455 YQYFEIFVKEQSEVGSM 471
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE QMVMRG R+ SM+ P +GA SVL G G
Sbjct: 393 QLKEQQMVMRGHRETSMVHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 451
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 452 TIIYQYFEIFVK 463
>BC026179-1|AAH26179.1| 418|Homo sapiens SEC61A2 protein protein.
Length = 418
Score = 33.5 bits (73), Expect = 0.91
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDV 573
+ G Y S PES D M S A K I+VSGSSAKDV
Sbjct: 338 VGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDV 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMI 512
Q KE QMVMRG RD SM+
Sbjct: 393 QLKEQQMVMRGHRDTSMV 410
>AK022640-1|BAB14148.1| 437|Homo sapiens protein ( Homo sapiens
cDNA FLJ12578 fis, clone NT2RM4001054, moderately
similar to Homo sapiens sec61 homolog mRNA. ).
Length = 437
Score = 33.5 bits (73), Expect = 0.91
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDV 573
+ G Y S PES D M S A K I+VSGSSAKDV
Sbjct: 338 VGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDV 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMI 512
Q KE QMVMRG RD SM+
Sbjct: 393 QLKEQQMVMRGHRDTSMV 410
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,336,540
Number of Sequences: 237096
Number of extensions: 1063085
Number of successful extensions: 5666
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5655
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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