Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E09
(804 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069569-1|AAL39714.1| 476|Drosophila melanogaster LD29847p pro... 64 2e-10
AE014134-1100|AAF52389.2| 476|Drosophila melanogaster CG9539-PA... 64 2e-10
AB062670-1|BAB78518.1| 476|Drosophila melanogaster DSec61alpha ... 64 2e-10
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 29 7.4
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 29 7.4
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 29 7.4
>AY069569-1|AAL39714.1| 476|Drosophila melanogaster LD29847p
protein.
Length = 476
Score = 64.1 bits (149), Expect = 2e-10
Identities = 52/139 (37%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTX--E 558
+ G Y S PES D M S A K IDVSGSSAKDV +
Sbjct: 338 IGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQ 397
Query: 557 GTPDGDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 398 HMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVM---ADFLGAIGSGTGILLAVTII 454
Query: 377 YQYCRDICQEQSEMXGMST 321
YQY +EQSEM GM T
Sbjct: 455 YQYFEIFVKEQSEMGGMGT 473
Score = 33.1 bits (72), Expect = 0.46
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE MVMRG R+NSMI P +GA SV+ G G
Sbjct: 393 QLKEQHMVMRGHRENSMIHELNRYIPTAAAF-GGLCIGALSVMADFLGAIGSGTGILLAV 451
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 452 TIIYQYFEIFVK 463
>AE014134-1100|AAF52389.2| 476|Drosophila melanogaster CG9539-PA
protein.
Length = 476
Score = 64.1 bits (149), Expect = 2e-10
Identities = 52/139 (37%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTX--E 558
+ G Y S PES D M S A K IDVSGSSAKDV +
Sbjct: 338 IGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQ 397
Query: 557 GTPDGDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 398 HMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVM---ADFLGAIGSGTGILLAVTII 454
Query: 377 YQYCRDICQEQSEMXGMST 321
YQY +EQSEM GM T
Sbjct: 455 YQYFEIFVKEQSEMGGMGT 473
Score = 33.1 bits (72), Expect = 0.46
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE MVMRG R+NSMI P +GA SV+ G G
Sbjct: 393 QLKEQHMVMRGHRENSMIHELNRYIPTAAAF-GGLCIGALSVMADFLGAIGSGTGILLAV 451
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 452 TIIYQYFEIFVK 463
>AB062670-1|BAB78518.1| 476|Drosophila melanogaster DSec61alpha
protein.
Length = 476
Score = 64.1 bits (149), Expect = 2e-10
Identities = 52/139 (37%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Frame = -2
Query: 731 LAGXXXYXSRPESXAXXXXDXGXPXXXXSXMXXSXAXLXKRXIDVSGSSAKDVTXTX--E 558
+ G Y S PES D M S A K IDVSGSSAKDV +
Sbjct: 338 IGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQ 397
Query: 557 GTPDGDARXP*QLHDPMN*TXTXXXXXXXXXXXXXXXVSAADFLGAIXSGXGILXXVTII 378
R +H+ T ADFLGAI SG GIL VTII
Sbjct: 398 HMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVM---ADFLGAIGSGTGILLAVTII 454
Query: 377 YQYCRDICQEQSEMXGMST 321
YQY +EQSEM GM T
Sbjct: 455 YQYFEIFVKEQSEMGGMGT 473
Score = 33.1 bits (72), Expect = 0.46
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -3
Query: 565 QXKEHQMVMRGXRDNSMIQ*TEPXHPDGXRXPEDRAVGAXSVLPTSXGPSXPAXGYXSPS 386
Q KE MVMRG R+NSMI P +GA SV+ G G
Sbjct: 393 QLKEQHMVMRGHRENSMIHELNRYIPTAAAF-GGLCIGALSVMADFLGAIGSGTGILLAV 451
Query: 385 PSFTSTVEIFVK 350
EIFVK
Sbjct: 452 TIIYQYFEIFVK 463
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 325 AHXXCKSRNDSGSRTXAXSSVXIVVSDLNXHH*VYVFIYXSVGCESIVXLYHKK 164
A S + S S SS +++ LN H +++ IY ++ + + YH+K
Sbjct: 261 AQLRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSAKVCLAGYHEK 314
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 325 AHXXCKSRNDSGSRTXAXSSVXIVVSDLNXHH*VYVFIYXSVGCESIVXLYHKK 164
A S + S S SS +++ LN H +++ IY ++ + + YH+K
Sbjct: 261 AQLRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSAKVCLAGYHEK 314
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 325 AHXXCKSRNDSGSRTXAXSSVXIVVSDLNXHH*VYVFIYXSVGCESIVXLYHKK 164
A S + S S SS +++ LN H +++ IY ++ + + YH+K
Sbjct: 261 AQLRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSAKVCLAGYHEK 314
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,612,378
Number of Sequences: 53049
Number of extensions: 333630
Number of successful extensions: 459
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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