Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_E06
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    30   2.4  
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376...    29   3.1  
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    29   4.1  
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032...    29   4.1  
03_01_0218 - 1717246-1717892,1717995-1718163,1718262-1720022,172...    28   9.5  

>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = -3

Query: 295 LPMTWXQGNEANKSEIIQKDFDSKIEELNPKQGSDSEPVETLEAGLKTDDSETLEVPEES 116
           L M   Q NEA  S +   +  +K+EE N +  +  E VE LEA  KTD    L V +E 
Sbjct: 777 LAMVQEQKNEAVASTV---ELGNKLEEQNQQISNLQEAVENLEAA-KTDMYNELTVCQEE 832

Query: 115 Q 113
           +
Sbjct: 833 K 833


>05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629,
            18238033-18238041,18238096-18238248
          Length = 1465

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 589  GFGILTTLCVLICLGSPKAKISAYDNSVRCFGELSSI 699
            GFG   TL  L+ LG P    S+   S+RC   L S+
Sbjct: 1111 GFGCQDTLTTLVILGCP--SFSSLPASIRCLSNLKSL 1145


>08_02_1091 +
           24256025-24256190,24256806-24257978,24258066-24258733,
           24258994-24260065,24260241-24260563,24260647-24260835,
           24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 553 WLNVMKNLSLMCQLNKKLSASTRVK 479
           W+N+  NLS  C++N K+++  R K
Sbjct: 805 WVNLSSNLSSKCKINSKITSPLRSK 829


>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
            18203336-18203551,18204257-18204361,18204761-18204919
          Length = 1401

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 589  GFGILTTLCVLICLGSPKAKISAYDNSVRCFGELSSI 699
            GFG   TL  L+ LG P    S+   S+RC   L S+
Sbjct: 1111 GFGCQGTLTTLVILGCP--SFSSLPASIRCLSNLKSL 1145


>03_01_0218 -
           1717246-1717892,1717995-1718163,1718262-1720022,
           1720531-1720610,1720854-1720981,1721004-1721012,
           1723701-1723742,1725891-1726002,1726358-1726514,
           1726678-1726762,1727628-1727713,1727998-1728042
          Length = 1106

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 634 SPK-AKISAYDNSVRCFGELSSIFS 705
           SPK A++ AYD+S+  FG+LS   S
Sbjct: 354 SPKQAEVCAYDDSMELFGQLSKAIS 378


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,902,361
Number of Sequences: 37544
Number of extensions: 231987
Number of successful extensions: 574
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)