Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_E06
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    26   0.45 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.5  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 506 KTERIDTRQRTDRLSSTER 450
           + +R+DT  RTD++SS +R
Sbjct: 449 RVDRMDTMDRTDKMSSMDR 467



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 506 KTERIDTRQRTDRLSSTER 450
           + +R+DT  RTD++S  +R
Sbjct: 497 RMDRMDTMDRTDKMSRIDR 515



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 500 ERIDTRQRTDRLSSTER 450
           + +DT  RTD++SS +R
Sbjct: 427 DTMDTMDRTDKMSSMDR 443


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 223 IEELNPKQGSDSEPVETLEAGLKTDDSETL 134
           I+   P  G+ SEP   L   L  DD ++L
Sbjct: 304 IQLKRPSDGATSEPFPFLMLPLGADDPDSL 333


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,235
Number of Sequences: 438
Number of extensions: 3046
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)