Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E03
(800 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 50 2e-06
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 50 2e-06
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 50 2e-06
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 50 2e-06
03_01_0034 + 318432-318825,318902-319851 50 2e-06
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 50 2e-06
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 50 2e-06
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 50 2e-06
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 32 0.61
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 32 0.61
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 30 1.9
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 30 1.9
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 29 4.3
02_04_0470 - 23183925-23184743,23184929-23185153 29 4.3
08_02_1491 + 27500532-27500972 28 9.9
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLV+EYQQ
Sbjct: 410 EAESNMNDLVAEYQQ 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 553 SIQEMFRRVSEQFTAMFRRKAFLHWYT 579
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLVSEYQQ
Sbjct: 590 EAESNMNDLVSEYQQ 604
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLV+EYQQ
Sbjct: 410 EAESNMNDLVAEYQQ 424
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 389 SIQEMFRRVSEQFTAMFRRKAFLHWYT 415
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLV+EYQQ
Sbjct: 426 EAESNMNDLVAEYQQ 440
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLVSEYQQ
Sbjct: 410 EAESNMNDLVSEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLV+EYQQ
Sbjct: 410 EAESNMNDLVAEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 394 SIQEMFRRVSEQFTAMFRRKAFLHWYT 420
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLVSEYQQ
Sbjct: 431 EAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWYT 679
+IQE+F R+S QFTAMFRRKAFL WYT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 646 EAESNMNDLVSEYQQ 602
EAESNMNDLVSEYQQ
Sbjct: 410 EAESNMNDLVSEYQQ 424
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWY 682
A+ E+F RI +F M+ ++AF+ WY
Sbjct: 383 AVAEVFSRIDHKFDLMYAKRAFVHWY 408
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWY 682
A+ E+F RI +F M+ ++AF+ WY
Sbjct: 464 AVAEVFSRIDRKFDLMYAKRAFVHWY 489
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWY 682
++ E+F RI +F M+ ++AF+ WY
Sbjct: 383 SVVEVFSRIDIKFDLMYSKRAFVHWY 408
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 759 AIQELFXRISXQFTAMFRRKAFLXWY 682
++ E+F RI +F M+ ++AF+ WY
Sbjct: 383 SVVEVFSRIDHKFDLMYSKRAFVHWY 408
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 543 SPAPAPRQTLRPRRRWPP 596
SP+P+P + P RRWPP
Sbjct: 27 SPSPSPLLSRAPSRRWPP 44
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 537 PRSPAPAPRQTLRPRRRWPPGYCWYS 614
PR P P P+ RP RR PP YS
Sbjct: 261 PRPPPPPPKARRRPCRRRPPSPMAYS 286
>08_02_1491 + 27500532-27500972
Length = 146
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 543 SPAPAPR-QTLRPRRRWPPGYCW 608
+PA APR RPRR W CW
Sbjct: 124 APAAAPRWYGRRPRRTWETDQCW 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,880,569
Number of Sequences: 37544
Number of extensions: 307442
Number of successful extensions: 848
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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