Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_E02
(796 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 38 0.007
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 31 1.1
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 31 1.4
02_03_0093 - 15120951-15121344,15121658-15121953,15122119-151224... 31 1.4
11_06_0022 + 19321886-19321918,19323059-19323131,19323587-193236... 30 2.4
08_02_0065 - 11849664-11849939 29 3.2
07_03_1160 - 24430240-24431268 29 3.2
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 29 4.3
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.3
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 29 5.6
05_01_0570 + 5061600-5062142,5062790-5062972 29 5.6
10_05_0031 + 8356046-8356361,8356439-8356648,8356735-8357043,835... 28 7.4
03_06_0728 + 35768830-35769324,35769404-35769462,35770440-357705... 28 7.4
03_01_0289 + 2242584-2242931,2242973-2243005,2244158-2244241,224... 28 7.4
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803... 28 7.4
02_05_0781 + 31715100-31715672 28 7.4
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38... 28 9.8
07_01_0160 + 1126674-1126937,1128442-1129998 28 9.8
05_07_0104 + 27715123-27715350 28 9.8
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503... 28 9.8
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 38.3 bits (85), Expect = 0.007
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +2
Query: 41 SSEVPAPRGRAGYVRLNDLQVLRADRGPKDFRAHPLNDSPAPLHPTSDLRPGSEPVQSRG 220
S + P PRGR G VR + L +R D G ++ + AP+H + R G+ ++R
Sbjct: 105 SKDAPLPRGRRGTVRSSKL--IRPDDGEEEGKEDENRGENAPVH--GEGRRGASR-RARA 159
Query: 221 VPAVNTTTRHAAPPRGRPTDG 283
P V TTR A P + G
Sbjct: 160 EPVVAPTTRRRAAPTSKIETG 180
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1
Query: 163 TLTPDVRSPSGVRTRSE*GGSRGQHYNQTRGATPRTPDRR 282
TLTP RSPS R S G N TRGA+P +RR
Sbjct: 151 TLTPPRRSPSPASRRMS-ATSSGPTLNGTRGASPVKTNRR 189
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 140 HP-LNDSPAPLHPTSDLRPGSEPVQSRGVPAVNTTTRHAAPPRGRPT 277
HP L +PAP P +L+P P P+ T AAP R T
Sbjct: 9 HPALQPAPAPAPPPPNLKPKPAPTTRGPCPSPRTLVARAAPRRDDST 55
>02_03_0093 -
15120951-15121344,15121658-15121953,15122119-15122419,
15123233-15123628,15123883-15124067
Length = 523
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 176 TSDLRPGSEPVQSRGVPAVNTTTRHAAPPR--GRPTDGSSRR*STTN-DVG 319
TS+ +PG PV++ G+ + +T R PPR G P S R S++ D+G
Sbjct: 415 TSESQPGQAPVRTGGMRLMTSTGRDNQPPRSSGVPPSPSEWRSSSSRWDLG 465
>11_06_0022 +
19321886-19321918,19323059-19323131,19323587-19323680,
19324383-19324499,19324584-19324641,19324713-19325114
Length = 258
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 23 RAGGRTSSEVPAPRGRAGYVRLNDLQVLRADRGPKDFRAHPLNDS-PAPLHPTSDLRPGS 199
R GR P R GYV+ D + AD+G A P ++ P +H T + P +
Sbjct: 139 RGRGRGRGRPPTKRKEVGYVQFEDESSMFADQG----EALPGEETVPETIHGTESVPPST 194
Query: 200 EP 205
P
Sbjct: 195 HP 196
>08_02_0065 - 11849664-11849939
Length = 91
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 446 VEEQPGRRCIAFRPGRLVLAQRGIPEHQRHRPGGLVGPPY 327
VEE+P RC A P + RG H+ H PG P +
Sbjct: 4 VEEEP--RCAAAAPIAATTSSRGHRHHRGHHPGAASTPAF 41
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 140 HPLNDSPAPLHPTSDLRPGSEPVQSRGVPAVNTTTRHAAPPRGRP 274
+P D P PL PT D+ P + P V PP +P
Sbjct: 42 YPKPDQPPPLLPTPDVVPNPNQPPLQPTPGVPPLPNPDVPPMNKP 86
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 200 EPVQSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STTNDVG 319
E + +RG T +HA PPRG P G + D G
Sbjct: 119 EKMMTRGRAETETARKHAPPPRGLPLLGEALTPQRKADAG 158
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 181 RSPSGVRTRSE*GGSRGQHYNQTRGATPR 267
+ PS +R+R GSRG+ Y+Q +PR
Sbjct: 122 KKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = -3
Query: 455 EHTVEEQPGRRCIAFRPGRLVLAQRGIPEHQRHRPGGLVGPPYRG 321
E +E R AFR L A RG E Q+ GG GP YRG
Sbjct: 34 EADLEAIAAREQRAFRYEALSAATRGFSERQKLGQGGF-GPVYRG 77
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 213 VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTS 317
VGG ++ RR P TG G +RRPT++
Sbjct: 159 VGGARGRAVRGSARRRPRKEETTGINGTARRPTST 193
>10_05_0031 +
8356046-8356361,8356439-8356648,8356735-8357043,
8357225-8357347,8357428-8357502,8357597-8357687,
8357775-8357866,8357890-8358020
Length = 448
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 113 DRGPKDFRAHPLNDSPAPLHPTS 181
D G R P+ + PAPLHP S
Sbjct: 333 DHGEPTARGAPVGEQPAPLHPKS 355
>03_06_0728 +
35768830-35769324,35769404-35769462,35770440-35770509,
35770626-35770748,35770836-35770964,35771268-35771717
Length = 441
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 131 FRAHPLNDSPAPLHPTSDLRPGSEPVQSRGVPAVNTTTRHAAPPRGRPTD 280
FR P +D PAP PT+ G P P+ +R P R R D
Sbjct: 26 FRRKPSDDQPAPPAPTAAAPRGKHPEPEVAEPSAK--SRRDEPRRKRKRD 73
>03_01_0289 +
2242584-2242931,2242973-2243005,2244158-2244241,
2244640-2245782
Length = 535
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 95 LQVLRADRGPKDFRAHP---LNDSPAPLHPTSDLRPGSEPVQSRGVPAVNTTTRH-AAPP 262
L L ++ G D+ P L +P P + +RPG +P Q+ V H AA
Sbjct: 455 LAKLASELGVSDYNIDPPGRLPSTPQPNQLHAQMRPGHQPTQATARQGVQANGGHVAAAS 514
Query: 263 RGRPTDG 283
+ R ++G
Sbjct: 515 QKRTSNG 521
>02_05_0970 -
33179180-33179210,33179297-33179441,33180307-33180362,
33180650-33180691,33180814-33180866,33181059-33181490,
33181630-33181707,33181785-33181870,33183588-33183689,
33183754-33183960,33184976-33185336,33185463-33185626,
33185709-33185817,33186468-33186485
Length = 627
Score = 28.3 bits (60), Expect = 7.4
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 29 GGRTSSEVPAPRGRAGYVRLNDLQVLRADRGPKDFRAHPLN-DSPAPLHPTSDLRPGSEP 205
GG+T S+ G G +R+ND+ + G D LN +SP L+ T +EP
Sbjct: 439 GGQTPSDPYGLMGLLGVIRMNDVDLSSLALG-IDLTTLGLNLNSPDNLYKTFGSPWSNEP 497
Query: 206 VQSRGVPAVNTTTRHAA--PPRGRP 274
++G P +T ++A PP +P
Sbjct: 498 --AKGEPEFHTPACYSAEQPPPLQP 520
>02_05_0781 + 31715100-31715672
Length = 190
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 206 VQSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STT 307
V + P RHAA P RP+ +SRR STT
Sbjct: 51 VSAAAQPQRAAKKRHAAAPPPRPSASTSRRSSTT 84
>10_01_0030 -
386008-388056,388166-388360,388931-389062,389167-389538,
389753-389894,392274-392533,392737-393015,394796-394939
Length = 1190
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +3
Query: 210 RVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLG 389
RVG P P P DAR G S + +VS V R Q + +V LG
Sbjct: 770 RVGSTPNKNAAPKQVWEPMDARKKASLGSSNGSSETVSGVDRSNQVGCSKDIVNCSQILG 829
Query: 390 QNQPAGSERDTSPT 431
+E S T
Sbjct: 830 SEHEELAEACKSIT 843
>07_01_0160 + 1126674-1126937,1128442-1129998
Length = 606
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 27 PGAEPPPRSPRLGGARG 77
PG PPPR+P GG G
Sbjct: 48 PGGRPPPRAPGRGGRAG 64
>05_07_0104 + 27715123-27715350
Length = 75
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 307 GRRLSPRRPVGRASSGWRRVS 245
GRRL P P R W RVS
Sbjct: 31 GRRLHPPAPAARGGGAWNRVS 51
>03_06_0285 +
32848085-32848988,32849057-32849245,32850136-32850311,
32850569-32851141
Length = 613
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 513 AVPSSWCXRAXXTVXCGAXSTPFXSPXDHHREXTASSXGLXLDXXPPP 656
A P S+ A + CG + P +H SS GL + PP
Sbjct: 536 ASPYSYDRPAAHPLYCGQNTLAMREPYAYHHPSEVSSVGLGMSYPSPP 583
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,749,563
Number of Sequences: 37544
Number of extensions: 407497
Number of successful extensions: 1667
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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