Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_E02
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    28   0.29 
AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    25   2.0  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   6.2  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 28.3 bits (60), Expect = 0.29
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 28  RGPNLLRGPR-A*GARGVCETQRSAGVESRSRAQGF*GPP 144
           RGP  L+G + A G +G+   +   G + R+ AQG  GPP
Sbjct: 8   RGPQGLQGEKGAPGIQGIRGDKGEMGEQGRTGAQGNAGPP 47


>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
           protein.
          Length = 259

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 268 SSGWRRVSGCSVDRGNPPTL 209
           + G++ V+GC+ D G P T+
Sbjct: 196 AGGYKNVTGCTADSGGPLTV 215


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 386 QRGIPEHQRHRPGGLVGPPYRGDRRRWSSTIASTTR 279
           +RG P+ +   P  +  PP     R  + T  +TTR
Sbjct: 551 KRGAPKRKATSPPAVATPPSTSRARTATRTATTTTR 586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,066
Number of Sequences: 2352
Number of extensions: 11598
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)